Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1988g00026 ATGGGATGGGAAGCGAAAGGCATTTTAATTGCCCGTCTTCTTCCCTACTGTGTTAAACTTACCGAAACCGGCGATATCATAAACGCCGTAAACACCCTCCAGAAAATCGCCACTCTCGCCGCCCCCGACGGCGACGCCCTTCAGCGCGTAGCCACTTACGCCAACGAAGGCCTCGCTCATCGGCTACTCAACAAGTACATGCCCGGTATTTCGGAATCACTCCGTCTGCCGAATCGCCTGTCGGCGTCGGAGCTAGTGCTTGTCCGGAGGCTCTTCCGAGAGTTGTGTCCCTTCTTGATGTTCTCATACTGGATCTCAAATCACGCCATTGCTGAAGCCATGAGAGGCGAATCGGTGATTCACGTTATCGATTTCAACGCTTCGGATCCCGAACAGTGGATCCATCTTCTTCATACATTGAAGGATCTGTATGAAGCGGATAATCGGCCGCTTCCATTTCTGAAAATCACGGGGATTCATGAGAAGAAGGAGGTCCTGGAAAAGACGGGGTTTGTATTGATGGGAGAAGCAAAGAAATTGAACTTCCGTTTCTCTTTCTATCCATTCGAGGGCAAATTGGAGAATCTGAAGTTTGATAAGTTGCCTTTGAACCCAGATGAGCCTATTGCGATCGTTTCTGTTCTTGGGCTTCATTCCCTCCTGTCAGCAAAAGATCAAACTGTCACAAGTGGGGTTAATTCTCCTGCAGAGTTATTTGAGAAACTAAAGATCAGACCTAGTCCTGATTCATCTCTATCTCCATGTCCTTCCCCTAAAATGGAGTATTTTCTAAGTGCAATCTGGAACCTCAAACCCAGGTTGATGGTTATCACAGAGCAAGAATCAAACACAAACGAGCTTGCCCTAAAGACAAGGCTTGAGAATGCTTTAGTCTTCTATGGTGCCCTCTTTGACTCCTTAGAGGCCAATGTTCCCAAAGCAAGAGAAGCAGATAGAACAGTAATGGAAAAGATGCTTCTGGGTGAAGAAATCAAGAACATAATTGCTTGTGAAGGAGTTCAAAGAAAAGAAAGGCATGAGAAAGCTGAGACATGGGTTCGTTGGTTTGAACTAGCTGGGTTTCAGAGAAAACCTTTGTGTTGTGCTAGGATGTTGCGAGCAACAAGGCCATTGCAAAACTACGGAAGAGGATATAAGCTCATGGAGCATGATCAATGTCTGTTTGTTTGTTGGAATGATCGACCACTCTACTCCATAGTGGCATGGAAGTTCTAA 1236 0.4612 MGWEAKGILIARLLPYCVKLTETGDIINAVNTLQKIATLAAPDGDALQRVATYANEGLAHRLLNKYMPGISESLRLPNRLSASELVLVRRLFRELCPFLMFSYWISNHAIAEAMRGESVIHVIDFNASDPEQWIHLLHTLKDLYEADNRPLPFLKITGIHEKKEVLEKTGFVLMGEAKKLNFRFSFYPFEGKLENLKFDKLPLNPDEPIAIVSVLGLHSLLSAKDQTVTSGVNSPAELFEKLKIRPSPDSSLSPCPSPKMEYFLSAIWNLKPRLMVITEQESNTNELALKTRLENALVFYGALFDSLEANVPKAREADRTVMEKMLLGEEIKNIIACEGVQRKERHEKAETWVRWFELAGFQRKPLCCARMLRATRPLQNYGRGYKLMEHDQCLFVCWNDRPLYSIVAWKF 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1988g00026 411 ProSiteProfiles GRAS family profile. 1 410 IPR005202 -
Pral1988g00026 411 Pfam GRAS domain family 12 410 IPR005202 -
Pral1988g00026 411 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 13 405 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1988g00026 Pral-Chr1988 180613 184244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1988g00026 4 410 GRAS Transcription Factor Family AT1G50420 40.639 3.62e-102 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral1988g00026 GRAS 7.7e-96 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1988g00026 - - pcin:129316687 412.92