Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1988g00025 ATGAAAGTGGAATGCAGGGGCTTATACCTCCCTCGTCTCCTTGCAACCTGTGCCAAGTATACTGAAAATCGTGACTTTCACAACGCAAGTACAGCGCTCGAGAACATTGCTAGTGTTGCTTCCCCTAATGGTGATTCGATGCAGAGGGTAGCAACATACTTAAATAAGGGGCTGGCTTACAGGTTGGTCAAGAATATTCGCGGTGTGCCTGAAGCCCTGCATCTGTCAAATCCCTTGCCAACCTCTGTGCAACAGTATGCAAGAAAGCTGTTCTTTGAATTTTGCCCATTCTTGAAGTTTTCTTATCTCATCACCAATCAGGCTATTCTTGAAACCATGAAAAGAGAACAAGTGTTTCATATTATTGATCTTAATGCCTGTGATGCTACTCAATGGATATATCTTCTTCATGCTTTGAAAGAACAGAGCCAAGGAGACCAACTACCTTTTGTGAAGATTACTGGGATTCATGAGAATAAAGAGGTTTTAGAACAAATAGGGTTTCAATTGATTCAAGAAGCTGAGAGACTGAACATCCCCATCCACTTCTATCCCATTGTCAGCCAACTGGAGAAACTTTGCTTTGAGAAACTGCCTTTGAAGCCAGGAGAGCCTCTTGCTATAAGTTCTGTTCTTCATCTTCATTCTCTTCTGGCAGTTGATGATCAAATCAGTCCTGATTCAGTCTTGCCACCTAGTCCTTCCCAATGTGTTTCGCCAAAGATGAGGTGGTTTCTAAGTGGCCTTTGGAAACTCCGACCGAGGTTGATGGTCATTACAGAACAAGAATCAGATAACAATGGACCTTCTCTGACAGACAGGCTTGATAAAGCACTGAATTTCTATGCTGCACTGTTTGATTGCTTGGAAGCTAATGTTTCAAAAGCAAAAGCAGCAGAGAGAATCATGCTAGAAAGGATGATTCTCGGGGAGGAGTTAAAGAACATGATTGCTTGTGATGGAGTTGATAGAAAAGAGAGGCATGGCAAGTTTTTTAAGACATGGAGTCCGTCGCTTGAACTGGCGGGGTTCATGAGGGTTCCTATGGACTATGAGAAAATGTTGCAGGTAACGAGGCCATTGCAGAGCTATGGGAGTGGATACAAGTTGCTAGACTTCAATCAATGCTTGTTTACATGCTGGAATGATCTCCCACTCTTTTCTATATCAGCCTGGACGTTCTAA 1185 0.4287 MKVECRGLYLPRLLATCAKYTENRDFHNASTALENIASVASPNGDSMQRVATYLNKGLAYRLVKNIRGVPEALHLSNPLPTSVQQYARKLFFEFCPFLKFSYLITNQAILETMKREQVFHIIDLNACDATQWIYLLHALKEQSQGDQLPFVKITGIHENKEVLEQIGFQLIQEAERLNIPIHFYPIVSQLEKLCFEKLPLKPGEPLAISSVLHLHSLLAVDDQISPDSVLPPSPSQCVSPKMRWFLSGLWKLRPRLMVITEQESDNNGPSLTDRLDKALNFYAALFDCLEANVSKAKAAERIMLERMILGEELKNMIACDGVDRKERHGKFFKTWSPSLELAGFMRVPMDYEKMLQVTRPLQSYGSGYKLLDFNQCLFTCWNDLPLFSISAWTF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1988g00025 394 Pfam GRAS domain family 12 393 IPR005202 -
Pral1988g00025 394 ProSiteProfiles GRAS family profile. 1 393 IPR005202 -
Pral1988g00025 394 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 9 388 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1988g00025 Pral-Chr1988 176283 177467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1988g00025 1 392 GRAS Transcription Factor Family AT1G50420 42.237 2.65e-115 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral1988g00025 GRAS 2.9e-99 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1988g00025 - - pcin:129316687 615.92