Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1988g00024 ATGAAAGTGGAAGACAGGGCCTTATGCTTAGTTCATCTGCTGAAGACTTGTGCTAGCTATACAGAAGATGGTGAGTTCAAGAAGGCAGGTTCTAGACTCGAGTGCATTGCTACTGTTGCTGCAGCTGATGGTGATCTGATGCAGAGGCTAGCTACTTATTTTCTTGACGGGCTTTCTTACAGGTTGGTCAAGAATATTCATGGTGTGCCTGAAGCTCTAAGTCTGCTGTCAATTCCCTTTTCAACGTTACTACAGCAATATGCCAGGAAGTTGTTCTTTGAGTTCTGTCCATTCTTGAAGTTCTCTCATATGATCACAAATCAAGCTATTGTTGAAGCCATGGGGGGAGATCAAGTGGTTCATATCATTGATCTTAATGCCTGTGATGCTGCACAATGGATATGTCTTCTTTATGGTTTGAAAGAAAAATGGCAAGGAATTGCAGTACCTTATGTGAAGATTACTGGGATTCATGAGAATAAAGGGGTTTTGGAGCAAACGGGGATTCAATTGATTCAAGAAGCTGAGAAAATGGGCATCCCCTTGAACTTCTATCCCATTGAGAGCCAATTGGAGAAACTTTGCTTTGAGAATTTGCCTGTCAAACCAGGAGAGCCCCTTGCTATAAGTTCTGTTCTTCAGCTACATTCTCTTCTGGCAGTTGATGATCAAATCAGTCCTGATTCAGTCTTGCCACCCAATCCTTCACAGTTCGATTCGCCTAAGATGAGTTGGTTTCTGAATAACCTTTGGAAACTCAAACCTAGGTTAATGGTCATTACAGAACAAGAATCAGATAATAATGCGCCTTCATTGACAGAAAGGCTTGATAAAACACTGAACTTCTATGCTGCACTGTTTGATTGCTTGGAAGCTAATGTTCCAAAAGAAAGAGCAATAGAGAGAATCATGGTGGAGAGGATGCTTCTTGGGGAGGAGATAAAGAACATTATATCTTGTGATGGAGTTGACAGAAAAGAGAGGCATGGCAAGTTTTATAAGACATGGCATCCCTGGCTTGAATTGGCTGGATTTAAGAGGGTTCCATTTCACTATGAAAGAATGTTGCAGATAACAAGGCCATTGCAGAGCTATGGGCGCGGATACAAGTTACTGGCAGACTCCAATAATCAATGCCTGTTTACATGTTGGAATGATCTTCCACTCTATTCTATATCAGCCTGGAAGTTCTAA 1194 0.4154 MKVEDRALCLVHLLKTCASYTEDGEFKKAGSRLECIATVAAADGDLMQRLATYFLDGLSYRLVKNIHGVPEALSLLSIPFSTLLQQYARKLFFEFCPFLKFSHMITNQAIVEAMGGDQVVHIIDLNACDAAQWICLLYGLKEKWQGIAVPYVKITGIHENKGVLEQTGIQLIQEAEKMGIPLNFYPIESQLEKLCFENLPVKPGEPLAISSVLQLHSLLAVDDQISPDSVLPPNPSQFDSPKMSWFLNNLWKLKPRLMVITEQESDNNAPSLTERLDKTLNFYAALFDCLEANVPKERAIERIMVERMLLGEEIKNIISCDGVDRKERHGKFYKTWHPWLELAGFKRVPFHYERMLQITRPLQSYGRGYKLLADSNNQCLFTCWNDLPLYSISAWKF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1988g00024 397 ProSiteProfiles GRAS family profile. 1 396 IPR005202 -
Pral1988g00024 397 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 391 IPR005202 -
Pral1988g00024 397 Pfam GRAS domain family 10 396 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1988g00024 Pral-Chr1988 171248 172441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1988g00024 1 396 GRAS Transcription Factor Family AT1G50420 43.084 2.90e-114 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral1988g00024 GRAS 4.4e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1988g00024 - - pcin:129316687 671.003