Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1988g00023 ATGGTTAAGATTATAGTCAAGCTTTTATGGAGTACAGTCCATGCTCGTCAAGATGATCATCTTTTTCAGAGCACATTCCATGCTCATCAAGATGATCAATATTCATCAAGGCAATGCTTCAGTGGCCTAAAAGGGGAAGACAGAGGCATATTTCTTATTCGTCACCTGGCAATCTGTGCTAAGTGTATTGAAGATGGTGACTTCAAGAATGCAGGCATTGCACTCAAGGACATTGCTTGTGTTTCTTCACTTGATGGAGATACAATGCAGAGGCTTGCTACTTTCTTCGAAATGGCATTTAGTTACAGGCTGATCAAACAGATTCGCCATGTGCCTGGAGTCTTTAATTGTTTGAAATTTCCCTGGTCAACTTCAGAACGACAATATGCCAGAAAGTTGTTCTTTGACTTTCTCCCATTCTTGAAGTTCTCTTATCTGATCACCAACCAGGCTATTCTTGAAGCCATGGGAGAAGAACCAGTGTTTCATATAATTGATCTCAGTGCCAGTAATGCTGCTCAATGGGTGTATCTTCTTCAAACTTTGAAAGAGCAACATCAAGGAAGCCGACTGCCTCTTGTGAAGATCACCATGATACATGAGAATAAAGATATTCTGGAAAAAATGGGGTTTGAATTGATTCAGAAAGCTCAAAAAATGAATTTCCCGTTCGAACTCTATGCCATTGTTGGCCAATTAGAGAATATTTGCTTTGAGACATTGCCTCATTTGAAGCCAGGAGAGCCCATTGCTATAAGTTCTGTTCTCATTCTCCATTCTCTTCTTGCAGTTGATGATCAAGTCAGCCCTGATTCAGATGTTCTACTTAAGATGAGGCAGTTTCTAATTCAGCTTTGGAAACTCCATCCCAGGCTCATGGTCATTACGGAACAAGAATCAGATAACAATGGGCCTAGTTTGACAGATACGCTTGATAAGGCACTGAACTTCTATGCTGCACTGTTCGATTGCTTGGAAGCTAATGTTCCAAAGGAGAGAGAAATAGAGAGAATCATGGTGGAAAGAATGATTCTTGGGGAGGAGATAAAGAATATGGTTGCTTGTGATGGAGTTGATAGAAAAGAGAGGCATGGAAAGTTTCTGAAGACATGGCGTCCATCGCTTCAATTAGCTGAGTTCAGGAGGGTGTCTATGAATTATGAAAGAATGCTGCAGGTGACAACGCCATTAATGCAGAACTATGGGCCAGGATACAAGTTAATAGAGAACAATCAGTGTTTGTTTACATGCTGGAACGATCTTCCACTCTATTCTATATCAGCCTGGAGGTACTGA 1296 0.409 MVKIIVKLLWSTVHARQDDHLFQSTFHAHQDDQYSSRQCFSGLKGEDRGIFLIRHLAICAKCIEDGDFKNAGIALKDIACVSSLDGDTMQRLATFFEMAFSYRLIKQIRHVPGVFNCLKFPWSTSERQYARKLFFDFLPFLKFSYLITNQAILEAMGEEPVFHIIDLSASNAAQWVYLLQTLKEQHQGSRLPLVKITMIHENKDILEKMGFELIQKAQKMNFPFELYAIVGQLENICFETLPHLKPGEPIAISSVLILHSLLAVDDQVSPDSDVLLKMRQFLIQLWKLHPRLMVITEQESDNNGPSLTDTLDKALNFYAALFDCLEANVPKEREIERIMVERMILGEEIKNMVACDGVDRKERHGKFLKTWRPSLQLAEFRRVSMNYERMLQVTTPLMQNYGPGYKLIENNQCLFTCWNDLPLYSISAWRY 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1988g00023 431 ProSiteProfiles GRAS family profile. 43 430 IPR005202 -
Pral1988g00023 431 Pfam GRAS domain family 53 430 IPR005202 -
Pral1988g00023 431 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 55 425 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1988g00023 Pral-Chr1988 165491 166894 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1988g00023 38 430 GRAS Transcription Factor Family AT1G50420 38.976 1.23e-101 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral1988g00023 GRAS 1.5e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1988g00023 - - pcin:129316687 493.041