Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1988g00022 ATGGAGTCTGGCTCACCTTACCAGTGGCTGAGAGAACTGAGATGGGACAATGGAGGCTTTAACCCAATCTGTGTTCTTCTTGACTGTGCAAAATGTGTAGCAACTGGAAGCATTAAGAACGCAGACATGGGTCTTGAGTTCATCTCGCACCTTGCATCACCAGATGGTGATGCAGTTCAGAGAATGGTGGCTTATTTCAGTGAAGCCCTTGCTTACAGAATCATGAAGAATCTACCAGGTGTTTATAAAGCCCTCCATTCCTCAAAGCCCTCATCAACCTCAGAACAAATATTGGTCCAAAAATACTTCTTTGAGCTGTGTCCTTTCTTGAAACTAGCCTACTTGACCACAAATCAAGCCATTGTTGAAGCCATGGAAGGTGAAAAGCTTGTTCACATCATAGACCTTCATTCTTCTGAACCTGCACAGTGGGTTGACCTTATTACGACTCTGAAGAAACGCCCAGAAGGCCCTCCTCATTTGAAAATCACAGGGATTCATGAGAAGAAAGAAGTTTTGGATCAAATGGGGCTTCATTTGACCACTGAAGCAGGAAAATTGGACTTCCCTTTACAGTTTAATCCAATTGTGAGCAAGTTGGAAGATCTTGATGTAGAAAGCTTGCCTGTCAAGTCTGGAGAAGCTCTTGCAATAAGTTCTGTTCTTCAGCTTCATTCTCTTCTTGCAAGTGATGATGAAATAGCTGCAAGAAACTCACCAGCCACACCCATGAATCTGCAGAGAGTTGTTCATCAGCAACACATGAGCCAGAGGACTTTTGCAGAATACTTAGAGAAGGACATGATCAATGCTTATATCTCAAGTCCAGACTCAGCACTATCACCACTTTCTCTCAGTGCTTCTCCTAAAATGGGTATGTTTCTGAGTTCCCTAAGGAAACTCCAACCCAAACTGATGGTGATCACTGAGCAAGAATCAAACCTTAATGGGTCAAACCTAATGGAAAGGATAGAGAAGGCACTGTACTTCTACAGTCCATTGTTTGATTGCTTGGACTCAACTATTTCAAGGACTTCACTGGAGAGACAGAAGCTTGAGAGTGAACTTCTTGGGGAACAGATCAAGAGGATCATTGCTTGCGAGGGTTTTGAGAGGAAGGAAAGGTATGAGAAGCTTGAAAAATGGATTCCAAGGCTGGAAATGGCTGGTTTTAGGAGGGTGCCATTAAGTTACTTTGGGATGTTGCAGGCAAAGAGGTTGTTGCAGAGCTATGGGTATAAGTACAAGATTAGGGAAGAGAAGGATTGTTTGCTTTTGTGTTGGAGTGATAGGGCACTTTTTTCTGTATCAGCTTGGAGTTTCAGAAGATGA 1332 0.4302 MESGSPYQWLRELRWDNGGFNPICVLLDCAKCVATGSIKNADMGLEFISHLASPDGDAVQRMVAYFSEALAYRIMKNLPGVYKALHSSKPSSTSEQILVQKYFFELCPFLKLAYLTTNQAIVEAMEGEKLVHIIDLHSSEPAQWVDLITTLKKRPEGPPHLKITGIHEKKEVLDQMGLHLTTEAGKLDFPLQFNPIVSKLEDLDVESLPVKSGEALAISSVLQLHSLLASDDEIAARNSPATPMNLQRVVHQQHMSQRTFAEYLEKDMINAYISSPDSALSPLSLSASPKMGMFLSSLRKLQPKLMVITEQESNLNGSNLMERIEKALYFYSPLFDCLDSTISRTSLERQKLESELLGEQIKRIIACEGFERKERYEKLEKWIPRLEMAGFRRVPLSYFGMLQAKRLLQSYGYKYKIREEKDCLLLCWSDRALFSVSAWSFRR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1988g00022 443 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 436 IPR005202 -
Pral1988g00022 443 ProSiteProfiles GRAS family profile. 13 440 IPR005202 -
Pral1988g00022 443 Pfam GRAS domain family 25 439 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1988g00022 Pral-Chr1988 157418 159111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1988g00022 1 443 GRAS Transcription Factor Family AT1G50420 53.422 8.97e-167 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral1988g00022 GRAS 1.7e-122 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1988g00022 - - gmx:100779726 667.537