Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1986g00007 ATGGGTAACAACTGCGTTGGATCAAGAATCTCCAGGGATGCATTATTTCCCACTATTTTCAGTTCACTTTGGTGGTCACGACCAACAGGGGATATGATTTCTCCTACCAGTAAATCATCGTCCAGAAGCCAAGGCCCAAATGTTTCAGAGACTGTTCAAAACAGCCCACCCCAGGTATTGAGAATCGATAGGATGGAGACGAAACCAGTAGAGGAAATAAAACCTCAACCTCAACCTCAAAAACAGGACGAAGCGATTAAATCTTCAAAAACACCAATGGAGGAATCAACACTACCCCAGTCGGTGAAGCTGAGGCATACGGAAGAGGGTGGACCGATTCCGACGAGCGTACGAAATGAAGAGATTATTCAACAAGTGGAACCTACAAAACAAAAGAAGCCCCGCAAGATGAAAAGGTTTGAATCGGCTGGGCTGCAAGCAGATTCTGTTTTGCAAACAAAAACTGGTCATCTTAAGGAGCTCTATAAACTGGGACGAAAACTTGGACATGGGCAATTTGGAACGAGTTTCCTTTGCATGGAGAAAGCTACAGGTAAAGAGTATGCCTGCAAGTCCATTGCAAAGCGAAAGTTGCTGACATATGAAGATGTCGAGGATGTGAGGAGGGAGATTCAGATAATGCATCACTTAGCCGGATGCCCAAATGTGATATCTATAAAAGGGGCTTATGAGGATCCTGTGGCAGTTCATGTTGTGATGGAACTATGTGCAGGGGGTGAGCTGTTTGATAGGATTGTGGAAAGAGGGCATTACACTGAAAGAAAAGCAGCAAAACTTGCCAGGACTATAGTTAGTGTTATAGAAGCTTGTCACTCCCTTGGAGTCATGCATCGTGATCTTAAGCCTGAGAATTTTCTTTTCGTCAGTAAGGATGAAGACTCTCCCCTTAAGGCTATAGATTTTGGATTGTCTACGTTTTTCAAACCAGGGGAAACTTTCACAGACGTTGTAGGAAGTCCTTATTATGTTGCACCAGAAGTTCTGTGCAAATGTTATGGTCCAGAAGCAGACGTGTGGAGTGCTGGTGTGATGATTTATATTCTGCTATGTGGGGTGCCTCCATTTTGGGCTGAAACAGAGGAGGATATATTCAAAGAGGTTTTGGATGGGAAGCTTGATTTCTCATCAGATCCTTGGCCTAAAATCTCAGACAGTGCTAAAGACTTAGTGAGGAGGATGCTTACTAGAGATCCGAGAAAACGGATAACTGCTCATGAAGTTCTTTGTCATCCTTGGATACGAGTTAATGGAGAAGCTCCAGATAAACCTCTTGATTCAGCAGTCTTGAGTCGCCTGAAGCAGTTTTCTGCCATGAATAAGCTCGAGAAAATGGCTATAAGAGTGATTGCAGAGAAGCTCTCCGAAGAAGAAATTGCTGGATTGAAAGAAATTTTTAAGATCATCGACGCAGACAACAGTGGTCAAATTACATTCGAAGAACTAAAGAATGGACTGAGAAGATTTGGTGCTGATCTGAATGAATCGGAAATACATGATCTAATGCAAGCCGCAGATGTTGATAACAGTGGAACAATTGACTACAAAGAATTCATAGCTGCCACATTGCATTTAAATAAAATTGAGAGGGAAGACCACCTGTTTGCAGCCTTCTCATACTTCGATAAAGATGGAAGCGGGTATATCACACCAGATGAGCTCCAACAAGCTTGCCAAGAATTTGGCATGGAAGAAATCCACTTAGAAGAAATTATCAGAGAAGCAGATCAAGATAACGATGGGCAAATAGATTACAAGGAATTTGTGGCAATGATGCAGAGAGGCAACACAGAGATGGGGAAAAAGGGTGAAAGGGGTAGCAATAGATTTAAGATTGGATATAGAGAGGCTCTGTCAGTGTATTAA 1884 0.4257 MGNNCVGSRISRDALFPTIFSSLWWSRPTGDMISPTSKSSSRSQGPNVSETVQNSPPQVLRIDRMETKPVEEIKPQPQPQKQDEAIKSSKTPMEESTLPQSVKLRHTEEGGPIPTSVRNEEIIQQVEPTKQKKPRKMKRFESAGLQADSVLQTKTGHLKELYKLGRKLGHGQFGTSFLCMEKATGKEYACKSIAKRKLLTYEDVEDVRREIQIMHHLAGCPNVISIKGAYEDPVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVSVIEACHSLGVMHRDLKPENFLFVSKDEDSPLKAIDFGLSTFFKPGETFTDVVGSPYYVAPEVLCKCYGPEADVWSAGVMIYILLCGVPPFWAETEEDIFKEVLDGKLDFSSDPWPKISDSAKDLVRRMLTRDPRKRITAHEVLCHPWIRVNGEAPDKPLDSAVLSRLKQFSAMNKLEKMAIRVIAEKLSEEEIAGLKEIFKIIDADNSGQITFEELKNGLRRFGADLNESEIHDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFSYFDKDGSGYITPDELQQACQEFGMEEIHLEEIIREADQDNDGQIDYKEFVAMMQRGNTEMGKKGERGSNRFKIGYREALSVY 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1986g00007 627 CDD STKc_CAMK 162 419 - -
Pral1986g00007 627 MobiDBLite consensus disorder prediction 81 100 - -
Pral1986g00007 627 CDD EFh 468 527 IPR002048 GO:0005509
Pral1986g00007 627 ProSiteProfiles Protein kinase domain profile. 162 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1986g00007 627 FunFam Calcium-dependent protein kinase 1 428 602 - -
Pral1986g00007 627 SUPERFAMILY Protein kinase-like (PK-like) 162 421 IPR011009 -
Pral1986g00007 627 ProSitePatterns EF-hand calcium-binding domain. 476 488 IPR018247 -
Pral1986g00007 627 FunFam Calcium-dependent protein kinase 1 164 247 - -
Pral1986g00007 627 MobiDBLite consensus disorder prediction 32 115 - -
Pral1986g00007 627 Gene3D Transferase(Phosphotransferase) domain 1 248 444 - -
Pral1986g00007 627 MobiDBLite consensus disorder prediction 32 60 - -
Pral1986g00007 627 SMART efh_1 539 567 IPR002048 GO:0005509
Pral1986g00007 627 SMART efh_1 573 601 IPR002048 GO:0005509
Pral1986g00007 627 SMART efh_1 467 495 IPR002048 GO:0005509
Pral1986g00007 627 SMART efh_1 503 531 IPR002048 GO:0005509
Pral1986g00007 627 SUPERFAMILY EF-hand 459 600 IPR011992 -
Pral1986g00007 627 ProSiteProfiles EF-hand calcium-binding domain profile. 573 604 IPR002048 GO:0005509
Pral1986g00007 627 CDD EFh 539 599 IPR002048 GO:0005509
Pral1986g00007 627 Pfam EF-hand domain pair 480 530 IPR002048 GO:0005509
Pral1986g00007 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 282 294 IPR008271 GO:0004672|GO:0006468
Pral1986g00007 627 Gene3D Phosphorylase Kinase; domain 1 164 247 - -
Pral1986g00007 627 Gene3D - 445 604 - -
Pral1986g00007 627 ProSiteProfiles EF-hand calcium-binding domain profile. 463 498 IPR002048 GO:0005509
Pral1986g00007 627 ProSiteProfiles EF-hand calcium-binding domain profile. 499 534 IPR002048 GO:0005509
Pral1986g00007 627 PANTHER SERINE/THREONINE-PROTEIN KINASE 151 594 - -
Pral1986g00007 627 ProSitePatterns EF-hand calcium-binding domain. 548 560 IPR018247 -
Pral1986g00007 627 SMART serkin_6 162 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1986g00007 627 ProSitePatterns EF-hand calcium-binding domain. 582 594 IPR018247 -
Pral1986g00007 627 Pfam Protein kinase domain 162 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1986g00007 627 FunFam Calcium-dependent protein kinase SK5 248 432 - -
Pral1986g00007 627 ProSiteProfiles EF-hand calcium-binding domain profile. 535 570 IPR002048 GO:0005509
Pral1986g00007 627 Pfam EF-hand domain pair 538 599 IPR002048 GO:0005509
Pral1986g00007 627 ProSitePatterns EF-hand calcium-binding domain. 512 524 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1986g00007 Pral-Chr1986 34948 37942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1986g00007 1 606 EF-hand Containing Proteins AT3G10660 66.032 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral1986g00007 Pkinase 2.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1986g00007 K13412 - qsa:O6P43_005746 903.279