Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral197g00007 ATGGTGAGCCCAAAATCGCAAAGCCCCGAGAGCGTTCCTTGCGATTTCTGTACGCAACAAACAGCTGTTCTGTATTGCAGAGCTGACTCTGCCAAGCTCTGTTTGTTCTGCGATCAACACGTTCACTCCGCTAACTTGCTCTCTCGCAAGCACTTGCGCTCTCAGATCTGCGATAATTGCTCCTCCGAGCCTGTCTCCGTCCGGTGTAACACCGACAACCTTGTTCTCTGCCAAGACTGCGATTGGGACGCTCATGCCTCATGCTCCGTCGCCGCTTCTCACCATCGTACGCCTGTTGAGGGTTTCACGGGGTGTCCTTCTTCATCTGAACTCGCTTCGCTTTGGGGATTTCAATTTGAGAATAAGACTTTAGAACAATCTCCTTCTTCTTTGATTCAAAACTGGGGTGATTATCGGGATTTATTTGTGCCACTTGAGTCCTGCCCTTTTAAATCCGATGGCGTTCCTCTTGAAGTTCATGACGTCATGGTTCCAAGAGAAACCAGTATGCTTTACCCGTCTCGGGGTTTCCAGGCGGTCTGTAACGCTACAAAGAAACAGACTCCCTGCTGTGGGAAGCAGAAACAGGTTATACGCAAGCAGTTGGTTGAATTGCTCAAGAGGGATTCGGTGGTTGTTGATGTTGGTGGCGGTGGCGGTGGCGGTGGCGATGGCGGTGATGTTGACGGTGAAGGTGGAATAGCTCGGGTAAGTGCTGCTAATGAGGCTGAGAATTTGGTTCCCGAAGCGCCAAGAAAGATCCAGGGAGATGGGCAGCCATTTGTTTTGGGAAATGATGTTCAAGGATTGCAGTTGCATCATATTGAAGGCGATAAATTGTGGCACAATAATTGCAAGAGGCACTCTGTTCAGATTTGGGATTTCCATTCTGGACGACTGAGGGATCAGGAAGAATCAATTGCACTTGAAGCTGCCTATGTAGCAAATGATGGCGGATTTGCAGCTAAGAATTTTAGTGAACTTATCAGAGAATCATCCATGACTGACACAAAATTGTTGCAAGAGATATACGATATGAATATTGCATACGATGATATGGCATCATATAACGGGATGACGTGTAATCTAATGAAAATGCAGAACCTGTCAAATAACCCAACAGCAGCAAGTCAGGGGCCTGCAGCAACATCAGAGAGCAACAACCTACCAACAAGGAAGCAATCTGGCAATGCCGCTGCTCCTGGAAAGCACAACGTTAACTGTAACGTCAAGGAGACACAGATTGGGGAACATCCTTTGCTTGTTACAGATGACAACATGGGAAAAGCCGGACGAAGCAAGGCTGACATGGACTTGATGGCCCAAAACAGGGGCACTGCAATGCTCCGTTACAAGGAGAAAAAGAAAACTCGAAGATACGAGAAGCACATAAGATACGAGTCTAGGAAGATGAGGGCTGATACTCGGAAACGAGTCAAAGGCCGATTTGTGAAAGCTAGTGACGCGGACGTACCTCCTAATGGTTATTAA 1491 0.4755 MVSPKSQSPESVPCDFCTQQTAVLYCRADSAKLCLFCDQHVHSANLLSRKHLRSQICDNCSSEPVSVRCNTDNLVLCQDCDWDAHASCSVAASHHRTPVEGFTGCPSSSELASLWGFQFENKTLEQSPSSLIQNWGDYRDLFVPLESCPFKSDGVPLEVHDVMVPRETSMLYPSRGFQAVCNATKKQTPCCGKQKQVIRKQLVELLKRDSVVVDVGGGGGGGGDGGDVDGEGGIARVSAANEAENLVPEAPRKIQGDGQPFVLGNDVQGLQLHHIEGDKLWHNNCKRHSVQIWDFHSGRLRDQEESIALEAAYVANDGGFAAKNFSELIRESSMTDTKLLQEIYDMNIAYDDMASYNGMTCNLMKMQNLSNNPTAASQGPAATSESNNLPTRKQSGNAAAPGKHNVNCNVKETQIGEHPLLVTDDNMGKAGRSKADMDLMAQNRGTAMLRYKEKKKTRRYEKHIRYESRKMRADTRKRVKGRFVKASDADVPPNGY 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral197g00007 496 ProSiteProfiles CCT domain profile. 444 486 IPR010402 GO:0005515
Pral197g00007 496 CDD Bbox1_BBX-like 13 56 - -
Pral197g00007 496 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 13 488 - -
Pral197g00007 496 ProSiteProfiles Zinc finger B-box type profile. 9 56 IPR000315 GO:0008270
Pral197g00007 496 SMART bboxneu5 57 99 IPR000315 GO:0008270
Pral197g00007 496 SMART bboxneu5 9 56 IPR000315 GO:0008270
Pral197g00007 496 Pfam CCT motif 444 486 IPR010402 GO:0005515
Pral197g00007 496 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Pral197g00007 496 MobiDBLite consensus disorder prediction 372 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral197g00007 Pral-Chr197 126035 129521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral197g00007 6 488 C2C2-CO-like Transcription Factor Family AT2G33500 39.673 8.63e-95 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Pral197g00007 CCT 1.8e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral197g00007 - - pcin:129307671 776.933