Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1973g00001 ATGTCAAGAAATCTTGCAGCAGCGGTTGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATAGTTATACTACTGATATGGTTCTGCCTGTTTCACAAGAGCAGTGTTTCTAGAAATTCAGAGACAGGGTCCTCTGAACCTTCCCAAGTGGGAAGACATGGTGGGATAGAGTTAACAGTAAGAGATGCTAGGCGTTTTGAGATTGAAGAACTGTTTCACGCTACAAAAAATTTCAGTGACAAAAATCTGATTGGAGAAGGAAAATTTGGGGAGGTTTACAGGGGTTTACTTCATGATGGAATGCTTGTAGCCATCAAAAAGCGCCATGGATTTCCTAGTCAGGAATTTGTAGATGAGGTACACTTCCTCTCATCCTTTCAACATCGAAATCTTGTAACTCTTTTGGGATACTGCCAGGAAAACAATCTACAGTTTCTCATATATGAGTACGTGCCTAATGGGAGCGTCTCCAGTCACTTGTATGGAGCTGCTCAACAATCACGTGATAAGCTGGAATTCAAGCATAGACTTTCCATAGCTCTGGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCCTTAAGCCCTCGTTTGGTGCATAAGGATTTCAAAACAGCCAATGTTCTTGTGGATGAAAACTTCATTCCTAAGGTTGCAGATGCAGGGCTTCGCAACATCCTAGGAAGAGTTGAAATTGCAGGGCCATCTTCTCAAGCTGCGGCAGATGAAATCTTCCTTGCTCCTGTATATATCTCTCTTGATTTAGTGAGAGAATTCAGAACATATTCTGAAAAGAGTGATGTATACAGTTTTGGGGTATTTTTGCTGGAACTGTTGAGCGGGAGAGAAGCAACTGAATCACCATCTTCAGACTCCAATCAGAATCTAGTTGAATGGGTGCAAAGTAAGCAAGACCCTGGGATTATGTCAGGCATAGTTGACGAAAGAATGGGAAGCAATTATACAGCAGAAGCCATGGAAGAGTTTATGTCACTGATAGTTCCATGTATTGACAGTTCAAGTGAGAGACGACCTGCAATGAGCTATGTGATGATGGAAATTGATCGAATACGTGAGAAAGAAAGAAACTTGACGACAGTGATGGGAGAAAGAACCCCTATTGTGACCCTTGGAAGCCAATTATTTGAAGCTAAAAAAGAATAA 1161 0.4238 MSRNLAAAVGGAAGAVALVGIVILLIWFCLFHKSSVSRNSETGSSEPSQVGRHGGIELTVRDARRFEIEELFHATKNFSDKNLIGEGKFGEVYRGLLHDGMLVAIKKRHGFPSQEFVDEVHFLSSFQHRNLVTLLGYCQENNLQFLIYEYVPNGSVSSHLYGAAQQSRDKLEFKHRLSIALGAAKGLAHLHSLSPRLVHKDFKTANVLVDENFIPKVADAGLRNILGRVEIAGPSSQAAADEIFLAPVYISLDLVREFRTYSEKSDVYSFGVFLLELLSGREATESPSSDSNQNLVEWVQSKQDPGIMSGIVDERMGSNYTAEAMEEFMSLIVPCIDSSSERRPAMSYVMMEIDRIREKERNLTTVMGERTPIVTLGSQLFEAKKE 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1973g00001 386 SUPERFAMILY Protein kinase-like (PK-like) 63 351 IPR011009 -
Pral1973g00001 386 Gene3D Phosphorylase Kinase; domain 1 41 150 - -
Pral1973g00001 386 FunFam Protein kinase superfamily protein 43 150 - -
Pral1973g00001 386 Pfam Protein tyrosine and serine/threonine kinase 82 351 IPR001245 GO:0004672|GO:0006468
Pral1973g00001 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Pral1973g00001 386 ProSiteProfiles Protein kinase domain profile. 78 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1973g00001 386 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 360 IPR047117 -
Pral1973g00001 386 Gene3D Transferase(Phosphotransferase) domain 1 151 374 - -
Pral1973g00001 386 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Pral1973g00001 386 FunFam Protein kinase superfamily protein 151 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1973g00001 Pral-Chr1973 268 4338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1973g00001 4 379 Receptor kinase-like Gene Family AT3G46290 34.336 1.68e-59 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Pral1973g00001 PK_Tyr_Ser-Thr 6.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1973g00001 - - gmx:100820178 556.214