Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1972g00004 ATGGGGTTGCAGCTGACTATTCTTCTCTTTATGCTGCATTTAGTTTTCAGTGCTCCACAACTTCATGAGTATAGAGCCACGAATCTGCACCATTCCAGAAGTCATTCAAGTATTGCGCTTCCACCATCCCAGTCATCTCCTAGAGTTCCTGCAAGTATTGCAATTCCACCTTCCAAGTCATTATCTCCTGGTTCTGTACGTTCTCCAATATCACATCATAAGCATCACCATTCCAGAAGAAAGTCCAGAAACCCAACCCCTACTTACAATCATGGAGGTCATTCGGTTTTTCCTGCACATCCTCCTTTTCCTTCTCCAAAGACCAGGAAATTGCCTGCACCTGCACCTGCACCGTTGCGAGCATTTTTATCAGTCCCCTTGAATGCTCCTTCTCCTTCGCCTAGAGTCCTACCCCTTCATTCAAAGCATACGAAGGATCCATCCCCATCACCGGTTTTGGGTTTGCCACCTCCACCTCCTAATAACGATTGCATGTCTCTGACTTGTTCAGAGCCCCTTACATATGCGCCTTCTGGATCACCTTGTGCTTGTGTTTGGCCCCTACAAGTTAAGCTCGACCTTGGCATTGCAATATACAAGTTTTTTCCTCTGGTCTCAAAGCTTGCTGAGGAAATTGCAGCCGGTGTTTCACTTAATCGGAGCCAAGTTCGCATTGTGGGAGCTGATGCAGCTAACCACCAACTAGAGAAGACCAATGTTCTTATAAACCTAGTACCTGAAGGAGTAAATTTCGATGATGCAACCGCATTTTCAATATATAAGAAATTCTGGCACAAGGAGATTCTCACAGATGCTTCCCTCTTTGGATCCTATGAAGTGCTCTATGTTCATTATCCAGGTCTTCCACCATCTCCGCCTTTGGCTTCCTCAAGCATCTCTAGTATGGATGATGTGCCATACCCTGGCTATGACTACAATGGAACAATAATGAAACCTTTAGGAGTAAATGTACCAGTGAATGGAAAGCACGGGAGTAGTGAAAGAGGAAGCATGATTATAATAATTGTGTTGTCATGTATAACTGTGTCTGTTCTATTCATTGGAGCTGCCTGGCTGTATCTGTTGAAATGTGGATCTTGTGTTCAACAACCTGAACATATCCCAGATGATTCAATCCTATCATCTTCAAAACCATCAGGGGCTATTAAGTCATTGACCTATGGGAGCATACCAGGTTCTAGATCAATGTCATTCAGCTCTGGAACAATAATATATACAGGATCTGTTAGGACCTTCACTTTGAATGAAATAGAGAAAGCAACAAACAACTTTGATGCTCTCAGAATAATAGGAGAAGGCGGCTTTGGGCTTGTCTATAAAGGTTTTCTACATGATGGGAGGGATGTGGCTGTGAAGATTCTGAAAAGGTATGATCAGCATGGTGGCCGTGAATTCTTGGCAGAAGTTGAGATGCTTAGCCGCCTTCACCACAGAAATCTAGTCAAACTGATAGGTATATGCATGGAGAATCAAACACGCTGCTTAATCTACGAGCTTATCCCTAATGGAAGTGTGGAATCCCACTTGCATGGTTCTGACAAGAAAACTAGTCCACTTGATTGGAATGCTAGGATGAAGATTGCACTTGGTGCAGCACGGGGACTGGCGTATCTCCACGAAGATTCAAATCCCTGTGTGATACACAGAGACTTCAAGTCTAGCAACATCTTGTTGGAACATGATTTTACACCAAAGGTTGCGGATTTTGGATTGGCTAGAACAGCACTGGACGGGGGAAATAAGCACATCTCCACACATGTTATGGGAACATTTGGGTACCTGGCGCCTGAATATGCAATGACTGGCCATCTTCTTGTCAAAAGTGATGTGTACAGCTATGGAGTTGTACTCCTTGAACTCCTAACAGGAAGAAAGCCCGTGGATTTTTCACAGCCACCCGGTCAAGAAAACCTGGTGGCTTGGGTTCGTCCGCTACTCACAAGCAAGGACGGTTTACAGACAATCATAGACCCGGTTTTAGAGAGCAACGTGTCTTTTGAAGCTGTGGTAAAAGTTGCAGCCATTGCATCGACGTGTGTGCAGCCAGAAGTCTCGCAACGCCCTTTCATGGGTGAAGTCGTTCAGGCCTTGAAGTTGGTTTGCTGTGAGTTTGACGATACAAGCATTATGAGATCAAGGAGCTTCCATGAAGAGAGTGTTCTAATCGATGGAGATGGGAAATTTTCAAGAATTTCAGGTGAGATGATGGGTTTCCAGACATTAACAGAATCAAAGTTGCTCAGTCCATTATCAGATCAGGGATTTGAGTCCTTCAGAAGGCATTCTGATTCAGAGCCTCTCACCACGGAGAAAAAAAGGAAGGTATGGCAGAAATTGCGAAGTTCATCAGGAGGAAGCGTTAGTGAGCATGGATTTTCAAACTTCCCCACATCTTGA 2418 0.4438 MGLQLTILLFMLHLVFSAPQLHEYRATNLHHSRSHSSIALPPSQSSPRVPASIAIPPSKSLSPGSVRSPISHHKHHHSRRKSRNPTPTYNHGGHSVFPAHPPFPSPKTRKLPAPAPAPLRAFLSVPLNAPSPSPRVLPLHSKHTKDPSPSPVLGLPPPPPNNDCMSLTCSEPLTYAPSGSPCACVWPLQVKLDLGIAIYKFFPLVSKLAEEIAAGVSLNRSQVRIVGADAANHQLEKTNVLINLVPEGVNFDDATAFSIYKKFWHKEILTDASLFGSYEVLYVHYPGLPPSPPLASSSISSMDDVPYPGYDYNGTIMKPLGVNVPVNGKHGSSERGSMIIIIVLSCITVSVLFIGAAWLYLLKCGSCVQQPEHIPDDSILSSSKPSGAIKSLTYGSIPGSRSMSFSSGTIIYTGSVRTFTLNEIEKATNNFDALRIIGEGGFGLVYKGFLHDGRDVAVKILKRYDQHGGREFLAEVEMLSRLHHRNLVKLIGICMENQTRCLIYELIPNGSVESHLHGSDKKTSPLDWNARMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVADFGLARTALDGGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWVRPLLTSKDGLQTIIDPVLESNVSFEAVVKVAAIASTCVQPEVSQRPFMGEVVQALKLVCCEFDDTSIMRSRSFHEESVLIDGDGKFSRISGEMMGFQTLTESKLLSPLSDQGFESFRRHSDSEPLTTEKKRKVWQKLRSSSGGSVSEHGFSNFPTS 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1972g00004 805 Pfam Protein tyrosine and serine/threonine kinase 434 704 IPR001245 GO:0004672|GO:0006468
Pral1972g00004 805 ProSitePatterns Protein kinases ATP-binding region signature. 437 459 IPR017441 GO:0005524
Pral1972g00004 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 553 565 IPR008271 GO:0004672|GO:0006468
Pral1972g00004 805 MobiDBLite consensus disorder prediction 786 805 - -
Pral1972g00004 805 MobiDBLite consensus disorder prediction 35 51 - -
Pral1972g00004 805 CDD STKc_IRAK 437 705 - -
Pral1972g00004 805 MobiDBLite consensus disorder prediction 764 805 - -
Pral1972g00004 805 Gene3D Transferase(Phosphotransferase) domain 1 507 721 - -
Pral1972g00004 805 PANTHER OS01G0750732 PROTEIN 156 728 - -
Pral1972g00004 805 FunFam Receptor-like serine/threonine-protein kinase ALE2 507 724 - -
Pral1972g00004 805 MobiDBLite consensus disorder prediction 764 784 - -
Pral1972g00004 805 MobiDBLite consensus disorder prediction 69 84 - -
Pral1972g00004 805 MobiDBLite consensus disorder prediction 35 112 - -
Pral1972g00004 805 ProSiteProfiles Protein kinase domain profile. 431 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1972g00004 805 Gene3D Phosphorylase Kinase; domain 1 403 506 - -
Pral1972g00004 805 SUPERFAMILY Protein kinase-like (PK-like) 410 704 IPR011009 -
Pral1972g00004 805 FunFam receptor-like serine/threonine-protein kinase ALE2 404 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1972g00004 Pral-Chr1972 33540 39173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1972g00004 161 798 Receptor kinase-like Gene Family AT5G56890 57.669 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pral1972g00004 PK_Tyr_Ser-Thr 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1972g00004 - - gmx:100814040 1049.65