Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1972g00002 ATGGCGGATCCTTCGATCATCCTGGAGTTGGTAGAGAAGCTTTCAAATATTGCAGGAAGAGGTCTGGAGTACAGAAGTACTCGCCAAATTCTGGAGTCGACCACCAGGGATTTGGGTCCTTTGGTTGAACAGATTGGACAATACGCTCAGGAGAATGATCTTCAAACTGAAGAAATTGAGAAGCTGAAAAAGATAATAGAAGCCAACCAGGAGGTTCTTGAAAAGTGCAAAATCCGTCCGCGGAATTTCTGGCTTGCCCCATACTTTCAAAGAAAGCTCGATGAAAAGTATCAGTCCCTTCTAAGGTATTGCTCAGTTCAGATGCAAACGCAGATAGCAAGGGATTTGAAGAGAGCCCTGTCCAAGCTGAGTTCTGATGATAATAGCCCTGGGAACCAAAGCACTTCATCTCAAGCGTCTAAAAGAATCAGAACACGGACTTTCAAGGGTAATGAAAGATTCCCAGAATTTACAGTGGGTTTGGATGGTCCATTCATGAAGGAGTTGAAGTCTAAACTGCTTCATGGGGACGAGCAGGTCTTGAATTTGCATGGCCTAGCAGGATCCGGGAAGACCACTTTGGCTAAAATACTCTGTCATGATCCCCAAGTCAAAGATAAGTTCAAGGATATCTTCTTTGAGACCCTGGGCTCACAATTTCGAGGCAATGAAGCGATCGATGAACTGCAAGATCGGCTGCCTGAGTTCGGGGGAAATCCAGTGTTGTTGGTTCTGGATGATGTTTGGCCCGCCTCAAAAAATGTTGTTGAAGAGTTTAGGGTCCAAATATCAGCAGGCTCTAAAATTTTCGTGACTTCAAGAGTCCCAATTATCACACTCGGACGATACCCCATGGAACAACTTTCTGAAGATGATGCAGTGGCTCTTTTCCTTCACTTTATTCAACCAAGCGACATTGATTTTGATGACAACGAAATACGAAAAATTGTCCTGCAGATAGTGAAAGGTTGTAAGCGTCTGCCACTTGCTCTTGAATTCATTGGTCGCGAACTACAAGATAAGGGTATTGAGGAGTTGCAAAAAGTACAGTTAGAATGGTCACGTGGCCAGTCTATCCTTGATTCGAATTCAGAGTTGCTTGCCCATCTCCAAAATTCCCTGAATCTGCTAGTAGATGAGTCCATCAGGGAATGCTTCATGGACCTTGGATTGTTTCCTGAAGATCAAAAGATACCTGTTTCTGCTTTGATTGACATCTGGACAGAACTTTATAACCTTGATGAACTTGGCATATGTGCAATGACCATCATCCGCAAATTGATGGACCTGAATCTGGCTGCTGGCATCAAAGTTAGAAGGATAGTCAGGATCAGGAGGGTTGAAGACAATTACTACAATAACCACTTCCTCGTGCAGCATGATCTTTTCAGAGAGTTGGCCATACATATAAGCAACCAAGAACTATTTGAGAATAGGAAAAGACTGATCATTGACATGAATGGGAATGATCATCCACAATGGTGGCCTCAGCAGAACCAGCAGGAAGGCATCACTGCTCACGCCCTGTCCTATTTTACCAAATGGTTTAAGGATCCGAATCAGAAATGCGTATCTGCTCGTATACTGTCTATATCAACAGACCAAGACATCAATCCCGATTGGTGCAACGTTCAAGCAGATGATGCTATTGTTCTGGTTTTGAATCTGAGAACTACAAAATACACTTTACCTGAATTCATTAAGCAAATGAGAAATCTGAGAGTTCTTATAGTGACAAATTATGGCTTCCGTCCCTCTGAGTTAAAAAACCTTGAGCTTCTCGAGTTTCTAAGGAAACTCAAAAGAATCAGATTGGAGGGGGTTTCAGTTCCTCCCCTTTGCAGATTGAAGAACGTGTGCAAGTTATCGCTTTATATGTGTGAAGTGAAAAAGGCTTTTGAAACCAGTTCCATTGAATTCTCAAAGGCAATGCCTGGTCTGGTGGAATTGAACATTGATTACTGCAAAGATTTGGCGAAGTTGCCATCTGGGCTCTGTGACACTACCACCCTGAGGAAGCTCAGCATCAGTCATTGCAATGAGTTTAATGAACTTCCACAAGAAATTGGGAAGCTTGAGAAGTTGGAATTACTAAGGATTAGTTATTGTCCTGATATTAAAGATATGCCAGAGTCGATCACAAAGCTGAAGAATCTAAGCTTTCTAGACATCACTTACTGTGGAAGCCTTAGGAAATTACCAGACAAGATTGGTGAGCTAAGGAGTCTGAGAAAGTTTTATATGCCGAGCTGCGCAATAATGGAATTGCCAGACTCAATCAAGGATATGGACAATCTCCAGAGTGTGATATGCGATGAGTACACATATCCTTTTTGGGAAGTCATCAAATATATCCACTCTGGACTAAACATAAAGATAGCCAAAACCATGGACACTGTCTTGGATTGGCTTCTTGATTTGAGCTCCAGGGGCTTGTTCCATTAA 2445 0.4249 MADPSIILELVEKLSNIAGRGLEYRSTRQILESTTRDLGPLVEQIGQYAQENDLQTEEIEKLKKIIEANQEVLEKCKIRPRNFWLAPYFQRKLDEKYQSLLRYCSVQMQTQIARDLKRALSKLSSDDNSPGNQSTSSQASKRIRTRTFKGNERFPEFTVGLDGPFMKELKSKLLHGDEQVLNLHGLAGSGKTTLAKILCHDPQVKDKFKDIFFETLGSQFRGNEAIDELQDRLPEFGGNPVLLVLDDVWPASKNVVEEFRVQISAGSKIFVTSRVPIITLGRYPMEQLSEDDAVALFLHFIQPSDIDFDDNEIRKIVLQIVKGCKRLPLALEFIGRELQDKGIEELQKVQLEWSRGQSILDSNSELLAHLQNSLNLLVDESIRECFMDLGLFPEDQKIPVSALIDIWTELYNLDELGICAMTIIRKLMDLNLAAGIKVRRIVRIRRVEDNYYNNHFLVQHDLFRELAIHISNQELFENRKRLIIDMNGNDHPQWWPQQNQQEGITAHALSYFTKWFKDPNQKCVSARILSISTDQDINPDWCNVQADDAIVLVLNLRTTKYTLPEFIKQMRNLRVLIVTNYGFRPSELKNLELLEFLRKLKRIRLEGVSVPPLCRLKNVCKLSLYMCEVKKAFETSSIEFSKAMPGLVELNIDYCKDLAKLPSGLCDTTTLRKLSISHCNEFNELPQEIGKLEKLELLRISYCPDIKDMPESITKLKNLSFLDITYCGSLRKLPDKIGELRSLRKFYMPSCAIMELPDSIKDMDNLQSVICDEYTYPFWEVIKYIHSGLNIKIAKTMDTVLDWLLDLSSRGLFH 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1972g00002 814 Gene3D - 373 468 IPR036388 -
Pral1972g00002 814 PRINTS Disease resistance protein signature 324 338 - -
Pral1972g00002 814 PRINTS Disease resistance protein signature 180 195 - -
Pral1972g00002 814 PRINTS Disease resistance protein signature 714 730 - -
Pral1972g00002 814 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 9 803 IPR039203 GO:0050832
Pral1972g00002 814 SUPERFAMILY L domain-like 459 771 - -
Pral1972g00002 814 Gene3D - 287 372 IPR042197 -
Pral1972g00002 814 Gene3D - 152 280 IPR027417 -
Pral1972g00002 814 ProSiteProfiles RPW8 domain profile. 1 142 IPR008808 -
Pral1972g00002 814 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 125 IPR008808 -
Pral1972g00002 814 Gene3D Ribonuclease Inhibitor 527 781 IPR032675 -
Pral1972g00002 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 389 IPR027417 -
Pral1972g00002 814 MobiDBLite consensus disorder prediction 122 145 - -
Pral1972g00002 814 Coils Coil 45 79 - -
Pral1972g00002 814 Pfam NB-ARC domain 241 351 IPR002182 GO:0043531
Pral1972g00002 814 Pfam NB-ARC domain 166 231 IPR002182 GO:0043531
Pral1972g00002 814 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1972g00002 Pral-Chr1972 7651 11425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1972g00002 597 770 WRKY Transcription Factor Family AT4G12020 28.283 2.92e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1972g00002 - - pcin:129290628 892.878