Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1970g00001 ATGAAGAAAGAAAGATACAGAAAAAGAGCAGCTTCCACGTCACACGGTTCCATATCGGTGATAGGGAAGCGGAGGATGATGGAGGACGCCGTGAAGATAGTACCGGGATTTATGGGAAGCTATGACTTTTTCGCAGTCTATGATGGTCACGGCGGAGCTACGGTGGCCAACGCTTGCCGCGAGAGGATGCACTTGGTGGTGGCGGAGCAAGTAATGAAGGAGGGAGCAGGTCAGAAGAGAGGATTGGTGGATTGGCGTGAAGTGATGTGCTCGTCCTTCATGAGAATGGATCGTGAAGTCGTCGGAGAAGATGGCACGGTTGGTTCCACGGCGGTGGTGGTAGTTGTCAGCAGTGACCACCTGCTTGTCGCCAATTGTGGAGATTCTAGAGCTGTACTTTGTCGTGGAGGAGTCGCCTTCCCACTTTCAAAGGATCATAAGCCAAATCGACCAGATGAAAGAGAGAGGGTGGAAAAAGCCGGAGGAACAGTGATAAGTTGGAACGGGGATCGTCTTGGAATACTCGCTACTTCAAGATCCATAGGCGATCATTGTATGAAGCCATATGTGGTATCAGAGCCAGAAGTAAAGGTATATGAAAGAACAGAGAGGGATGAGTTTATGGTAATAGCGAGCGATGGGCTATGGGATGTGATATCCAACAAGTTGGCTTGCGAGGTGGTGAGGAGGATTTTCAAGATGGGGTTCGTTAAAAATGGGGCAGCAGAAGCTGCAGCATTATTAGCAGAATTGGCTATGGCTCGAGGAAGCAGGGACAATATTAGCGTTATTGTAGTCCGGCTTAAGTAG 810 0.4926 MKKERYRKRAASTSHGSISVIGKRRMMEDAVKIVPGFMGSYDFFAVYDGHGGATVANACRERMHLVVAEQVMKEGAGQKRGLVDWREVMCSSFMRMDREVVGEDGTVGSTAVVVVVSSDHLLVANCGDSRAVLCRGGVAFPLSKDHKPNRPDERERVEKAGGTVISWNGDRXLGILATSRSIGDHCMKPYVVSEPEVKVYERTERDEFMVIASDGLWDVISNKLACEVVRRIFKMGFVKNGAAEAAALLAELAMARGSRDNISVIVVRLK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1970g00001 270 SMART PP2C_4 4 267 IPR001932 -
Pral1970g00001 270 CDD PP2Cc 14 269 IPR001932 -
Pral1970g00001 270 ProSitePatterns PPM-type phosphatase domain signature. 43 51 IPR000222 GO:0043169
Pral1970g00001 270 Gene3D - 8 270 IPR036457 -
Pral1970g00001 270 ProSiteProfiles PPM-type phosphatase domain profile. 14 269 IPR001932 -
Pral1970g00001 270 FunFam Protein phosphatase 2C 50 18 270 - -
Pral1970g00001 270 Pfam Protein phosphatase 2C 18 262 IPR001932 -
Pral1970g00001 270 SUPERFAMILY PP2C-like 9 270 IPR036457 -
Pral1970g00001 270 PANTHER PROTEIN PHOSPHATASE 12 269 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1970g00001 Pral-Chr1970 3868 5340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1970g00001 15 270 PP2C-type Phosphatase Gene Family AT4G26080 46.780 2.20e-84 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1970g00001 K14497 - gmx:100785905 337.421