Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1968g00003 ATGGACAGCAGCTCCCCAACTGAGGGTCTTGACAATTTTGATGAGTGGACAATTGATTTGAGAAAGCTCAGTATGGGTGAGGCTTTTGCGCAAGGGGCTTTTGGGAAACTCTACAGGGGGACTTACAATAACGAAGATGTTGCAATCAAAATTTTGGAGAGGCCTGAAAATGATGTAGCAAAGGCTCAATTGATGGAACAACAGTTTCAGCAGGAGGTCATGATGCTGGCTACACTAAAGCATCCTAATATAGTTCGTTTTATTGGTGCATGCCGGAAGCCAAAGGTCTGGTGTATTGTAACAGAGTATGCTAAGGGTGGTTCAGTTCGACAGTTTTTAATGAAGCGGCAAAATCGATCAGTTCCCCTCAAATTGGCAGTCAAACAGGCTTTAGATGTTGCAAGGGGAATGGCATATGTTCATGGCCTTCAATTGATCCACAGAGACCTCAAGTCTGACAATCTTTTAATTTTTGGTGACAAATCAATTAAGATTGCAGACTTTGGAGTTGCTCGGATTGAGGTGCAAACCGAAGGAATGACACCTGAGACGGGAACATATCGTTGGATGGCTCCGGAGATGATCCAACACAGGCCTTACACTCAAAAGGTGGATGTATATAGTTTTGGTATTGTTCTTTGGGAGCTCATTACTGGAATGCTTCCATTTCAGAACATGACAGCCGTACAAGCGGCATTTGCAGTCGTCAACAGAAATGTTCGCCCGACCATACCCAACGACTGCTTACCCATTCTCCGAGACATCATGACAAGATGCTGGGATCCCAACCCTGACGTTAGGCCACCTTTTACTCAAATCGTGGCGATGCTAGAGAATGCAGAGACCGAGATCATGACGACTGTTCGTAAGGCCCGTTTTCGGTGTTGCATGACGCAACCCATGACATCTGACTGA 915 0.4546 MDSSSPTEGLDNFDEWTIDLRKLSMGEAFAQGAFGKLYRGTYNNEDVAIKILERPENDVAKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPKVWCIVTEYAKGGSVRQFLMKRQNRSVPLKLAVKQALDVARGMAYVHGLQLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNRNVRPTIPNDCLPILRDIMTRCWDPNPDVRPPFTQIVAMLENAETEIMTTVRKARFRCCMTQPMTSD 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1968g00003 304 ProSiteProfiles Protein kinase domain profile. 23 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1968g00003 304 SUPERFAMILY Protein kinase-like (PK-like) 11 277 IPR011009 -
Pral1968g00003 304 Gene3D Transferase(Phosphotransferase) domain 1 106 301 - -
Pral1968g00003 304 Gene3D Phosphorylase Kinase; domain 1 12 105 - -
Pral1968g00003 304 CDD STKc_MAP3K-like 30 277 - -
Pral1968g00003 304 Pfam Protein tyrosine and serine/threonine kinase 24 277 IPR001245 GO:0004672|GO:0006468
Pral1968g00003 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Pral1968g00003 304 PIRSF ILK 3 296 - -
Pral1968g00003 304 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 16 280 - -
Pral1968g00003 304 SMART serkin_6 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1968g00003 304 FunFam Serine/threonine-protein kinase isoform 1 13 105 - -
Pral1968g00003 304 PRINTS Tyrosine kinase catalytic domain signature 248 270 IPR001245 GO:0004672|GO:0006468
Pral1968g00003 304 PRINTS Tyrosine kinase catalytic domain signature 185 195 IPR001245 GO:0004672|GO:0006468
Pral1968g00003 304 PRINTS Tyrosine kinase catalytic domain signature 204 226 IPR001245 GO:0004672|GO:0006468
Pral1968g00003 304 PRINTS Tyrosine kinase catalytic domain signature 101 114 IPR001245 GO:0004672|GO:0006468
Pral1968g00003 304 PRINTS Tyrosine kinase catalytic domain signature 139 157 IPR001245 GO:0004672|GO:0006468
Pral1968g00003 304 FunFam serine/threonine-protein kinase HT1 106 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1968g00003 Pral-Chr1968 598 16985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1968g00003 1 304 MAP Kinase Kinase Kinase AT2G24360 85.526 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral1968g00003 PK_Tyr_Ser-Thr 4.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1968g00003 - - gmx:100788536 593.578