Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1967g00002 ATGATCAAACATATAGAAGCCTTGGAAGGCGTGTATTTGATGTCTACATTCAGACTTTCAACCCCCAAGAAACATCCCTGGAGCAGTTTTGGCTGCAATTGTGGTCGCAGGAGTGAGTATTGTCGTCCTGATATTGGGCATACTCTGGTGGAGAGGTTACCTGGAAAAAGAAGCTCATTAGCAATTGAGCTAAAGGGCTTAAGTCTGCAAACTGGTTTATTTACCTTGCGCCAAATCAAAGCAGCAACAGATAACTTTGATGCATCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGGGCTTTCTATCAGATGGCACAATGATAGCAGTGAAGCAGCTTTCTTCTAAATCAAACCAAGGAAACCGCGAGTTCATCAATGAGATTGGCATGATCTCTGCTTTGCAACACCCTTGTCTTGTTAAGCTCTATGGTTGTTGTGTTGAGGGGGATCAGTTGTTGTTGGTATATGAATACATGGAAAACAATAGCCTTGCTCGTGCCTTGTTTGGGCCAGAGGAATGCCGCTTAAAATTGGACTGGCCAATAAGACAGAAGATTTGTGTTGATCTTGCCCGAGGTTTGGCTTTCCTCCATGAAGAATCAAGACTAAAGATTGTTCACCGGGACATCAAGGCCACAAATGTGCTACTTGACAAAGACCTGAATGCAAAAATATCAGATTTTGGACTAGCCAAGCTTTATGAAGAGGAAAATACCCACATAAGCACTCGAATTGCTGGGACCTATGGATACATGGCACCTGAATATGCAATGCATGGCTATTTAACTGACAAAGCAGATGTCTATAGTTTTGGAATCGTTGCTTTGGAAATTGTAAGTGGAAGGAGTAACGCTTCTCGCCGACAAAAGGAAGACTGTTTCAATCTTCTTAATTGGGCACATGTTTTGAAAGAGAATGGCTATTTAATGGAGCTAGTTGATCCAAGGTTGGGTTCAGATTTTGACAGGGAGGAGGTAATGGTGATGATCAATGTGGCTCTCCTATGCACTAATCCATCTTCATCACCCAGGCCCTCCATGTCTTCAGTGCTAAGCATGCTTGAAGGAAGAACTGTAGTTCCAGAGTTCGTTTCTGATCAAAGTGAGGAAGCAAGTAAGATGAAGTTAGAGGCAATGAGACAATATTACCGAGAGATGGAAGAAAACCAGGCGAATGATGAGACTGAAACTCATTCCAAGAGCCTCTTGGGGATGTCCGCTTCTTCATCTACATCAGCTAGAGATCTCTATCCTGTTCGCCTAGATTCTTCCTACTTCGCGAAAAGAAAGTCTCAGATAGAAGAATAG 1317 0.4275 MIKHIEALEGVYLMSTFRLSTPKKHPWSSFGCNCGRRSEYCRPDIGHTLVERLPGKRSSLAIELKGLSLQTGLFTLRQIKAATDNFDASNKIGEGGFGPVYKGFLSDGTMIAVKQLSSKSNQGNREFINEIGMISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPEECRLKLDWPIRQKICVDLARGLAFLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLYEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRSNASRRQKEDCFNLLNWAHVLKENGYLMELVDPRLGSDFDREEVMVMINVALLCTNPSSSPRPSMSSVLSMLEGRTVVPEFVSDQSEEASKMKLEAMRQYYREMEENQANDETETHSKSLLGMSASSSTSARDLYPVRLDSSYFAKRKSQIEE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1967g00002 438 SMART serkin_6 86 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1967g00002 438 MobiDBLite consensus disorder prediction 391 416 - -
Pral1967g00002 438 Pfam Protein kinase domain 88 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1967g00002 438 Gene3D Phosphorylase Kinase; domain 1 53 161 - -
Pral1967g00002 438 Gene3D Transferase(Phosphotransferase) domain 1 162 386 - -
Pral1967g00002 438 CDD STKc_IRAK 92 359 - -
Pral1967g00002 438 MobiDBLite consensus disorder prediction 399 416 - -
Pral1967g00002 438 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 62 392 - -
Pral1967g00002 438 ProSiteProfiles Protein kinase domain profile. 86 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1967g00002 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Pral1967g00002 438 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 55 161 - -
Pral1967g00002 438 FunFam Putative LRR receptor-like serine/threonine-protein kinase 162 369 - -
Pral1967g00002 438 SUPERFAMILY Protein kinase-like (PK-like) 70 367 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1967g00002 Pral-Chr1967 1269 4506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1967g00002 63 390 Receptor kinase-like Gene Family AT1G07650 70.517 1.36e-163 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1967g00002 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1967g00002 - - gmx:100785451 574.704