Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1963g00001 ATGGATGTATTTGTGTTCTATCTGGCCAAATATTGGGCCAATGATGACAACGTTCGCAAGGCACTCCATATAAGGCAGGGAAACATAGGGAAATGGCGACGTTGTTTTGATGGGAACTATAAGTCTGAAATCGTTAGCAGCTTTGAATATCATTTAAATCTCAGTGCAAAAGGCTTTCGCTCCTTAATCTACAATGGGGATCATGACCCAATTATATCATTCATGGCGACTCAAGCACGGATCAGAAATTTAAACTACACAATCTTGGATGACTGGAGGCCATGGCTCGTTCAAGGCCAAGTTGCTGGATACACAAAGACTTACTCAAATCAGATGACATTTGCGACTGTAAAGGGTGCAGGACATATAGCACCAGAGTACGAGTCTGAAGAATGTTTTTCCATGTTCTCTAGGTGGAAATCTAATAAGCCCTTGTATCAGCTTACTGCAGCTTCTGGCTCCAATACTGTACATTACCTTCCTGGATTCCAAGGGCCCCTTCCTTTTCATCTCCAGACTGGGTATGTGGGAGTGGGAGAGGAACAATCAGAAGATGAACAAGTGTTCTATTACTTTGTTAAGTCACAGAATAATCCACACAGGGATCCTCTTCTGCTTTGGCTATCTGGTGGTCCTGCTTGCTCTTCTTTTTCTGGTCTTATTTTTGAAATAGGTCCAATTGCTTTCAAAGTGGAAGAATACAAGGGCAGTTTGCCTAATTTGACCTTGAGGCCGCATGCTTGGACAAAGGTAAGTAGTATAATTTTTGCAGACTTGCCCGTTGGCACTGGCTTCTCCTATTCAAAATCGTTATCCTCTCCTCAACCCAGTGATTGGAAATTAATTCATCAAGCGCATCGATTTCTCAGAAAGTGGCTGATTGATCATCCTGAATTTCTCTCAAATGAAGTGTATATTGGAGGTGATTCTTACTCTGGGATTCCTGTCCCTGTACTTGCTCAAGAAATTTCAAATGGAAACGAAGAAGGCATCCAACCATGGATAAATATCCAGGGATACGTGCTAGGGAACGCCTTGACGACAAATACAGAAACTGAGAATTATATGATCCCATTTCTGCATGGAATGGGAATAATCTCTGATGAACTTTACACGTCATTCTACGATCATTGTGTGGAAGACAAGAAAAATGTTGTTTGCTCCAAAGTCATCGAATATCTCAACAAGCTAATTTTAGGACTTAATCTCTACAACATTTTGGACCCAAAATGTGAGGCGCCACGAGAAGTTTCCAGAGAGAAGATTCAGTTGTTTCCTCCTACTTCTATGGATCACACATTGCCTCCATTAAGTTGCAGGAAATATGTGTATCATCTGGCCAAATATTGGGCCAACGATGAGAACGTTCAGAAGGCACTGCATATAAGAAAGGGAAGCATAGGGAAATGGCGACGTTGTTTTGATGGGAAGTACAAGTCTGAAATCGTTAACAGCTTTGAATTTCATTTAAATGTCAGTGCAAAAGGCTTTCGTTCCTTAATCTACAATGGGGATCATGACCCGGTTATATCATTCATGGCGACTCAAGCATGGATCAGAAATTTAAACTACACAATTTTGGATGACTGGAGGCCATGGCTCGTTCAAGGCCAAGTTGCTGGATACACGAGGACTTACTCAAATCAGATGACGTTTGCGACTGTAAAGGGTGCAGGACATATAGCACCAGAGTACAAGTCTGAAGAATGTTTTGCCATGTTCTCTAGGTGGATATCTGATAAGCCCTTGTAG 1752 0.4178 MDVFVFYLAKYWANDDNVRKALHIRQGNIGKWRRCFDGNYKSEIVSSFEYHLNLSAKGFRSLIYNGDHDPIISFMATQARIRNLNYTILDDWRPWLVQGQVAGYTKTYSNQMTFATVKGAGHIAPEYESEECFSMFSRWKSNKPLYQLTAASGSNTVHYLPGFQGPLPFHLQTGYVGVGEEQSEDEQVFYYFVKSQNNPHRDPLLLWLSGGPACSSFSGLIFEIGPIAFKVEEYKGSLPNLTLRPHAWTKVSSIIFADLPVGTGFSYSKSLSSPQPSDWKLIHQAHRFLRKWLIDHPEFLSNEVYIGGDSYSGIPVPVLAQEISNGNEEGIQPWINIQGYVLGNALTTNTETENYMIPFLHGMGIISDELYTSFYDHCVEDKKNVVCSKVIEYLNKLILGLNLYNILDPKCEAPREVSREKIQLFPPTSMDHTLPPLSCRKYVYHLAKYWANDENVQKALHIRKGSIGKWRRCFDGKYKSEIVNSFEFHLNVSAKGFRSLIYNGDHDPVISFMATQAWIRNLNYTILDDWRPWLVQGQVAGYTRTYSNQMTFATVKGAGHIAPEYKSEECFAMFSRWISDKPL 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1963g00001 583 SUPERFAMILY alpha/beta-Hydrolases 7 146 IPR029058 -
Pral1963g00001 583 PRINTS Carboxypeptidase C serine protease (S10) family signature 257 267 IPR001563 GO:0004185|GO:0006508
Pral1963g00001 583 PRINTS Carboxypeptidase C serine protease (S10) family signature 292 317 IPR001563 GO:0004185|GO:0006508
Pral1963g00001 583 PRINTS Carboxypeptidase C serine protease (S10) family signature 244 256 IPR001563 GO:0004185|GO:0006508
Pral1963g00001 583 PRINTS Carboxypeptidase C serine protease (S10) family signature 550 563 IPR001563 GO:0004185|GO:0006508
Pral1963g00001 583 Gene3D alpha/beta hydrolase 164 583 IPR029058 -
Pral1963g00001 583 Gene3D alpha/beta hydrolase 3 153 IPR029058 -
Pral1963g00001 583 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 128 IPR001563 GO:0004185|GO:0006508
Pral1963g00001 583 FunFam Serine carboxypeptidase-like 19 150 417 - -
Pral1963g00001 583 Pfam Serine carboxypeptidase 161 579 IPR001563 GO:0004185|GO:0006508
Pral1963g00001 583 Pfam Serine carboxypeptidase 9 140 IPR001563 GO:0004185|GO:0006508
Pral1963g00001 583 SUPERFAMILY alpha/beta-Hydrolases 156 582 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1963g00001 Pral-Chr1963 35095 46237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1963g00001 446 583 Calmodulin-binding Proteins AT2G22960 61.151 2.99e-56 186