Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1961g00001 ATGGGTCTTGATGATAGTGGTTCTTGGAGCAGCGATAAGTTCGATGCTGGTGAAGATAAGCAGGACACCCCTCCTTTCCCTGAGGTTCAGGTGGGCGGTTCCCCTTTGTATAAAGTAGGGAAAAAGCTAGGGGAGGGTGGACTTGGACAAGTATATGTTGGTCGCCGTGTTAGTGGCGAAAATATGAACGAGACAACTGGACCTGAAGCTGTGGAGGTTGCATTGAAATTTAAGCATAAAAGTAGTCAAGGATATGAATATGGACCACCAGAGGAGTGGCAAGTATATGACGCTCTAGGTGGCAGCCATGGTGTGCCAAGAGTATACTACAAGGGTAGGCAAGGTGGCTATTATATCATGGTTATGGATATGCTGGGACCTAGCTTGTGGGATGTTTTAGTTGTTGTGAATTCCAGAATGTCCGTTCAAATGATTGCATGCATTGCAGTTGAAGCTATATCCATATTTGAGAAGATGCATTCTCGAGGGTATGTGCATGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGTTCTCCGGGGACCGCAGATGAAAAGAGGCTGTTTCTGGTTGATTTTGGATCAGCCTCTAGATGGCGGGATGAATTAACAGGTTCACATGTGGAGTATGACCAAATGCCAGGTTACTTTAGGGGCACAATCAGCTATGCGAGTGTGCACGCACATTTAGGGAGAACTGCCAGCAGGAGGGATGATCTGCAATCCCTTGCTTATACCTTGATTTTCCTTCTTCGAGGTCATCTCCCTTGGATGGGGTGCAAGGGAGGAGAAAGTGGGTTTTTGGTTTGCAAGAAGAAGATGGAAATAACTCCAAAGCTCTTATGTGGTTTCTTTCCCGAGCCTTTTAGGCATTTTGTTGAACATGTAGTAAATTTGAAGTTTGATGAAGATCCTAACTATGCAAAATATATTTCTCTCTTTGATGGGATTGTTGGTCTAAATCCACATAGTAGACCAATTAATACGGAAGGTGCACAAAAGCTCATTGGTCATAAGAGAGATCGTTTGGCCATGGAAGAAGAGGATGAACAACCAAGAAAAAAGTTACTAATGGATCTACCAGCAACACAGTGGATAAGTATATTTACTGCTCGCAGACCCATGAAACAAAGATATCACTACGATGTGTCAGATGCAAGGCTTTCCCAGCTCATCCAAAAGGGAAATGAGGATGGCTTTTATATAAGCAGTGTGGCTTCATGTTCCAACCTATGGGCAGTAATCATGGATGACGGTTTCAAAAAACAAGTTTATGAACTCTCTCCTTACTTTCTTCATGAGGAGTGGATAATGGATCAGTGGGAAAAAAATTACTACATCACTGCAGTAGCTGGAGCTAAAAACGGGAGCTCATTAGTAGTAATGTCCAAGGGCACACCATATGTACAACAATCTTTCAAAGTTAGCGATTCATTTCCTTTCAAGTGGATTAACAGAAAATGGAGGGAAGGCTTCCATGTTACTGCAATGGGTACCTCAGGGGTGAGGTGGGCAGTAGTTATGTCACAGGATGCAAGATTTCGCGATCAGGTGGTTGAACTTGATTTTATTTATCCCAGCGAAGGGATTCGCAGGCGTTGGGACAGGGGATATACAATAACATCAGCAGCAGCTACTGACGACCTGGCTGCGTTTGTTCTTAGTGTGCCAAGGAGGAAACTTGCTGCAGATGAAAGACAAGAGACCCTCAGGACCGGGCTTTTTCCTAGCATGCATGTGAAGGACAAATGGGCAAAGAACCTTTATATTTCATCAATTTGCTGTGGGAGAACTTTTAGTGTTTGA 1803 0.4382 MGLDDSGSWSSDKFDAGEDKQDTPPFPEVQVGGSPLYKVGKKLGEGGLGQVYVGRRVSGENMNETTGPEAVEVALKFKHKSSQGYEYGPPEEWQVYDALGGSHGVPRVYYKGRQGGYYIMVMDMLGPSLWDVLVVVNSRMSVQMIACIAVEAISIFEKMHSRGYVHGDVKPENFLLGSPGTADEKRLFLVDFGSASRWRDELTGSHVEYDQMPGYFRGTISYASVHAHLGRTASRRDDLQSLAYTLIFLLRGHLPWMGCKGGESGFLVCKKKMEITPKLLCGFFPEPFRHFVEHVVNLKFDEDPNYAKYISLFDGIVGLNPHSRPINTEGAQKLIGHKRDRLAMEEEDEQPRKKLLMDLPATQWISIFTARRPMKQRYHYDVSDARLSQLIQKGNEDGFYISSVASCSNLWAVIMDDGFKKQVYELSPYFLHEEWIMDQWEKNYYITAVAGAKNGSSLVVMSKGTPYVQQSFKVSDSFPFKWINRKWREGFHVTAMGTSGVRWAVVMSQDARFRDQVVELDFIYPSEGIRRRWDRGYTITSAAATDDLAAFVLSVPRRKLAADERQETLRTGLFPSMHVKDKWAKNLYISSICCGRTFSV 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1961g00001 600 ProSiteProfiles Protein kinase domain profile. 37 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1961g00001 600 PANTHER CASEIN KINASE-RELATED 37 549 - -
Pral1961g00001 600 MobiDBLite consensus disorder prediction 1 34 - -
Pral1961g00001 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Pral1961g00001 600 SMART serkin_6 37 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1961g00001 600 Gene3D Transferase(Phosphotransferase) domain 1 16 357 - -
Pral1961g00001 600 Pfam Protein kinase domain 37 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1961g00001 600 CDD STKc_CK1 50 313 - -
Pral1961g00001 600 SUPERFAMILY Protein kinase-like (PK-like) 37 316 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1961g00001 Pral-Chr1961 4068 15541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1961g00001 37 193 EF-hand Containing Proteins AT2G17890 30.539 2.50e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pral1961g00001 Pkinase 9e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1961g00001 - - mnt:21394019 914.064