Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral195g00001 TCTAATCTTGATTTCAATACTCATGTGAAGAAACCTTCAAGTAACCAGGATGTGTTGGCCTCTATTGATACATCTGTGCCTTATATCCCTGATTCTTCGCTGATATCCGCACCCACATCTGGAGCTGATGCTAGTAAAGAAGTGCTCTTGGAAAATGTACTGGTTAGTAGATCATCAAATGAGCGGAATATTCTTTCAGCTGGGATTGAAGAGAACAATGCAGAAGCTATTAATTCTGGTTCACTGGATGATGTCGAGAAAAACAGGCTTGTTGAAGCTGCTACAAAAATCCAGGCTGGTTTTAGGGGCTATCAGGCTCGTGAGGAATTTCAGACACTAAAAGGTGTCATACAACTGCAAGCTCTTATTCGAGGCCAGTTGGTTAGGAGGCAAGCTGTTTCCACTTTATACTGTGTGAAGGGAATTGTAAAAGTTCAAGCGCTAGTTCGCGGTCACAAGGTTCGACATTCTGATATTGGGGTCGCTGTCCTCAAAATTTTCAAGGATGCTAAATGTTCAAATTCTAACGGAGTAGTCACGACTACACAGGCGGAGAAGCTGCCAACCGGTCTTTTTCTTAACCAGCTTCTGGCCACGTCATCCTCAACAGTTCCTTTACATCTTAATTTTGGTCCTGAAGCACCAAACTTCACCTGGAAGTGGCTTGAGCGCTGGACTAAGTCAAACTTTTGGGCGCCTCCTCCCAAATCAGAGAAGAACCATGGCAAGTCCAACGAGAAAAGTGCCAATTGTCAAACGTTTGAACATAACAAGGGGAAACCCAAGAGAAGTTTCAAGAAGGCTTCTGATTTGAAAGTCGATGATGGCTCAACCTCAGGGCCAAACAATCTTAAACAGCCTGCGAAAAAGGTTTCAAGCCACCTTATGCAGTCATCACGGGAGCAACCACAAACGGAAACAAAAAACCGTATTAAGAAAACTTCGACGCAGAGTGTTTCTAGTACATCTGAGGTTGCCCCTGAGAAAAGGAAACACATCCATGGAAAACTTCCAGGTCATTCTGTTACTGATGTTTCAGAGCATCGTGCTTGCGTTTCAGCAGATAAAATGAAAAGTTTGGGAGTGTCAAAGTCACAGCAGTCTGATTTTGAAAAGAGCCTTGGGTTGCAAGAAAAAGATGAGAATGTCCACTCACACGCAAATCCTACCGCTGATTCGCAGACTAGCGTAAAGAATGGTAAAGAAGTTATTCAAGGAGATAGCGAGGACTCTAAAATTAATGGGGACCCTCAGAACTCGCTGAGAAGAGCTTCACTGCCTGCCAGTTTCAATGATCAAGATAATAACAGTTCCCATAACACTCCAAGAGTTCCTAGCTATATGGCCCCCACTGAATCTGCAAAAGCTAAGCTAAGAGCACAAGGCTCTCCTGGGTTTGCTGGTGACTTGGTAGATAAAATTGGTGTAACCAGGCGTCATTCACTTTCAACTTCATTAAATGGAAGGTTTACCTCATTTTCCCCACGAACAGAACGACTGTTAAACACAAGCAGCAGAGGAGTGATCAGGACTGACAGATCTCTGTCATTATTAAGGGATGGACCTGAGAAGTTCATCCAACCCCAGTGGAGAAGGTGA 1599 0.4384 SNLDFNTHVKKPSSNQDVLASIDTSVPYIPDSSLISAPTSGADASKEVLLENVLVSRSSNERNILSAGIEENNAEAINSGSLDDVEKNRLVEAATKIQAGFRGYQAREEFQTLKGVIQLQALIRGQLVRRQAVSTLYCVKGIVKVQALVRGHKVRHSDIGVAVLKIFKDAKCSNSNGVVTTTQAEKLPTGLFLNQLLATSSSTVPLHLNFGPEAPNFTWKWLERWTKSNFWAPPPKSEKNHGKSNEKSANCQTFEHNKGKPKRSFKKASDLKVDDGSTSGPNNLKQPAKKVSSHLMQSSREQPQTETKNRIKKTSTQSVSSTSEVAPEKRKHIHGKLPGHSVTDVSEHRACVSADKMKSLGVSKSQQSDFEKSLGLQEKDENVHSHANPTADSQTSVKNGKEVIQGDSEDSKINGDPQNSLRRASLPASFNDQDNNSSHNTPRVPSYMAPTESAKAKLRAQGSPGFAGDLVDKIGVTRRHSLSTSLNGRFTSFSPRTERLLNTSSRGVIRTDRSLSLLRDGPEKFIQPQWRR 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral195g00001 532 ProSiteProfiles IQ motif profile. 90 118 IPR000048 GO:0005515
Pral195g00001 532 MobiDBLite consensus disorder prediction 275 324 - -
Pral195g00001 532 MobiDBLite consensus disorder prediction 411 447 - -
Pral195g00001 532 MobiDBLite consensus disorder prediction 232 447 - -
Pral195g00001 532 Pfam IQ calmodulin-binding motif 92 111 IPR000048 GO:0005515
Pral195g00001 532 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
Pral195g00001 532 Pfam IQ calmodulin-binding motif 114 131 IPR000048 GO:0005515
Pral195g00001 532 Gene3D - 87 136 - -
Pral195g00001 532 MobiDBLite consensus disorder prediction 325 354 - -
Pral195g00001 532 Pfam Protein of unknown function (DUF4005) 433 510 IPR025064 -
Pral195g00001 532 SMART iq_5 89 111 IPR000048 GO:0005515
Pral195g00001 532 SMART iq_5 137 159 IPR000048 GO:0005515
Pral195g00001 532 SMART iq_5 112 133 IPR000048 GO:0005515
Pral195g00001 532 MobiDBLite consensus disorder prediction 387 402 - -
Pral195g00001 532 ProSiteProfiles IQ motif profile. 114 141 IPR000048 GO:0005515
Pral195g00001 532 MobiDBLite consensus disorder prediction 256 273 - -
Pral195g00001 532 PANTHER IQ-DOMAIN 5-RELATED 71 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral195g00001 Pral-Chr195 401 4235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral195g00001 44 532 IQD Protein Family AT2G02790 35.209 1.51e-75 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral195g00001 - - aprc:113869184 490.73