Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1959g00001 ATGTCTCTTTCATCGGAGTACTCTGCCGCCGGTTATTTGTTCTGCCGCGAGGACGCTGCCGACGTGTTGTGCTGCGGTGAAGATGTGTCGATCTCCCGCCACCCTCCATCACCATCATCTTACCTCCCGCTCTATTCTCCGCCGTCCGAGGAGATCACCATCGGCGAACTCATCGACGTAGAGTCACACCTCATGCCGAGCCAAGATTACCTGAATCGCCTCCGTGATTGTCCGATCGACTTCACCAATCGCCAGAAGTCCACTAACTGGATCTTCAAGGTGCACGCCCATTACCAGTTTCGTCCGGTGACGGCGTTACTCTCCGTCAACTACTTCGACCGTTTCCTCTCGTGCTCTTCTCTTCCGCCAGCTGGGTGGCCGTTTCAGCTATTATCAGTGGCGTGCTTGTCTCTTGCGGCGAAAATGGAGGAACGTCGAATCCCGAACTTGCTAGACCTGCAAATATTCGATCCCGGCTTCGTTTTTGAATCCAAGTCGGTTCAGAGGATGGAGCTCTGGATCATGTCCCAACTCAACTGGAGATTGCGATCTGTCACGCCCTTCGATTACCTCCATTACTTCTTCTCCAAGCTCCCTGCGTCCTCATCCGATCCTAAACCCGGATCGGCGACCCGGTTGTTCAGAGCCTCCCAGTTCATTCTTACCACCACCCGCGTGCTCGATTTCTTGAGATTCGCACCGTCAAGTATTGCCGCCGCCGCCGTGCTCTGTTCGGCCGGCGTAGCCTCTGACGTCTACCCCCAATCACTGCCGTTTTTCATGACAGCATGA 792 0.5492 MSLSSEYSAAGYLFCREDAADVLCCGEDVSISRHPPSPSSYLPLYSPPSEEITIGELIDVESHLMPSQDYLNRLRDCPIDFTNRQKSTNWIFKVHAHYQFRPVTALLSVNYFDRFLSCSSLPPAGWPFQLLSVACLSLAAKMEERRIPNLLDLQIFDPGFVFESKSVQRMELWIMSQLNWRLRSVTPFDYLHYFFSKLPASSSDPKPGSATRLFRASQFILTTTRVLDFLRFAPSSIAAAAVLCSAGVASDVYPQSLPFFMTA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1959g00001 263 CDD CYCLIN_AtCycD-like_rpt1 83 180 - -
Pral1959g00001 263 PANTHER CYCLINS 59 246 IPR039361 -
Pral1959g00001 263 SMART cyclin_7 89 176 IPR013763 -
Pral1959g00001 263 Gene3D - 57 246 - -
Pral1959g00001 263 Pfam Cyclin, C-terminal domain 185 248 IPR004367 -
Pral1959g00001 263 SUPERFAMILY Cyclin-like 53 182 IPR036915 -
Pral1959g00001 263 FunFam D6-type cyclin 67 183 - -
Pral1959g00001 263 Pfam Cyclin, N-terminal domain 57 182 IPR006671 -
Pral1959g00001 263 Gene3D - 67 183 - -
Pral1959g00001 263 ProSitePatterns Cyclins signature. 84 115 IPR006671 -
Pral1959g00001 263 CDD CYCLIN_AtCycD-like_rpt2 185 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1959g00001 Pral-Chr1959 3072 4208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1959g00001 13 253 Core Cell Cycle Gene Families AT5G65420 42.798 7.46e-61 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1959g00001 K18810 - jre:109009685 283.878