Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral1957g00004 | ATGAGGGAAGAGGAGCCGAATTGGTTATCGCGATGGGAGGAACTCCCTGCTCCGAACGAACTCATGCCCCTCTCCCAAACCCTAATCACTCCTGATCTTGCTTTGGCTTTTGATATCCGAAATCCTCATGTCAATACCTCACAACAACTCCCTCAGGCCCCTCCTCCGTCAAATCCTCTGCCTTCTCCTGGAAATCCTACTCACCCAAACTCCACGGACTTTGCTGATTCCGCTGAATTGGGTTCTGGTATTGGAGGCGAGGAACCCGCTCGCACCCTTAAACGTCCTCGCCTCGTTTGGACTCCACAGCTTCACAAGAGGTTTGTTGATGCTGTGGCACACTTGGGAATAAAGAATGCTGTGCCCAAGACTATAATGCAGTTGATGAGTGTGGATGGATTAACCAGGGAAAACGTGGCTAGCCACTTGCAGAAATACCGGCTTTATCTTAAGCGCATGCAAGGATTATCCGGTGGCGGCAGCGGCGGAGGCAGCGGCGGCGGAGGAGGAGGCGGTCCATTGGCTGCTTCTGCAGATCCTGCCACTGACCATTTGTTTGCTAGTTCGCCTGTGCCACCCCATTTCTTGCACCCAACTAGGCCTAATTCGGATCATTTCTTGCCGTTTGTGCCGGTCCAGACTCTGCAGCACCACCATCACCAGCAGCACATGGTGGCAGCTGCGGCGGCGGCGGCCGCGCATCCACAGTTGCAGCCACAGTATCACAGACAGGTGGGACATTTTGGTTCACCGCCAAACGGGCACTTTGAGCATCCCTTTCTAACAAGGCAGTCTCAAGCTCAGCCACTTCACAGGATGGGAGCCCCAGTGCACAATCCAGTAACCGCTAATTATGTGGAGGACATGGAATCGGCCAACGCGGCAGGAGCGAGAAAGGTGTTATCTGCACTTCTGCAGATCTAA | 924 | 0.54 | MREEEPNWLSRWEELPAPNELMPLSQTLITPDLALAFDIRNPHVNTSQQLPQAPPPSNPLPSPGNPTHPNSTDFADSAELGSGIGGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGSGGGSGGGGGGGPLAASADPATDHLFASSPVPPHFLHPTRPNSDHFLPFVPVQTLQHHHHQQHMVAAAAAAAAHPQLQPQYHRQVGHFGSPPNGHFEHPFLTRQSQAQPLHRMGAPVHNPVTANYVEDMESANAAGARKVLSALLQI | 307 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral1957g00004 | 307 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 96 | 148 | IPR006447 | GO:0003677 | |
Pral1957g00004 | 307 | MobiDBLite | consensus disorder prediction | 159 | 199 | - | - | |
Pral1957g00004 | 307 | FunFam | Two-component response regulator | 91 | 154 | - | - | |
Pral1957g00004 | 307 | Pfam | Myb-like DNA-binding domain | 99 | 147 | IPR001005 | - | |
Pral1957g00004 | 307 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 100 | 151 | IPR017930 | - | |
Pral1957g00004 | 307 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 6 | 268 | IPR044841 | GO:0003700|GO:0006355 | |
Pral1957g00004 | 307 | Gene3D | - | 92 | 154 | - | - | |
Pral1957g00004 | 307 | MobiDBLite | consensus disorder prediction | 45 | 90 | - | - | |
Pral1957g00004 | 307 | MobiDBLite | consensus disorder prediction | 52 | 66 | - | - | |
Pral1957g00004 | 307 | SUPERFAMILY | Homeodomain-like | 92 | 152 | IPR009057 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral1957g00004 | Pral-Chr1957 | 11091 | 13637 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral1957g00004 | 1 | 302 | G2-like Transcription Factor Family | AT3G10760 | 57.391 | 4.25e-94 | 280 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Pral1957g00004 | Myb_DNA-binding | 2.3e-08 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral1957g00004 | - | - | qsa:O6P43_006330 | 432.95 |