Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1956g00004 ATGTTGGCGATGGAGAAGGATTTTGATTCCAAGTTGAAGATTCAGAGTAGTCCGTCTGGTGATGGGAGTGTCCAGAGATCTCAGAGCATTCCTTTCCGGGCTCCTCAGGAGAATTGCTCCATCCAGGATTTTGAATTGGGAAAGATCTACGGCGTTGGTTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACGGGATCTGTTTATGCATTGAAGATCATGGACAAAAAATTTATCACCAAGGAGAACAAAACAGCTTATGTGAAGTTGGAACGGTTAGTGCTTGATAAATTGGATCATCCTGGCATTGTGCGGCTGTTTTTCACATTTCAAGACACTTTTTCTCTGTACATGGCACTTGAATCCTGTGAAGGCGGAGAACTTTTTGATCAAATAACCAGGGTAAGCTAA 414 0.4275 MLAMEKDFDSKLKIQSSPSGDGSVQRSQSIPFRAPQENCSIQDFELGKIYGVGSYSKVVRAKKKDTGSVYALKIMDKKFITKENKTAYVKLERLVLDKLDHPGIVRLFFTFQDTFSLYMALESCEGGELFDQITRVS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1956g00004 137 MobiDBLite consensus disorder prediction 13 29 - -
Pral1956g00004 137 SUPERFAMILY Protein kinase-like (PK-like) 24 135 IPR011009 -
Pral1956g00004 137 MobiDBLite consensus disorder prediction 1 29 - -
Pral1956g00004 137 Pfam Protein kinase domain 45 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1956g00004 137 ProSiteProfiles Protein kinase domain profile. 44 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1956g00004 137 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Pral1956g00004 137 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 135 - -
Pral1956g00004 137 Gene3D Phosphorylase Kinase; domain 1 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1956g00004 Pral-Chr1956 31287 33606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1956g00004 1 135 AGC Kinase Gene Family AT5G04510 78.519 1.03e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Pral1956g00004 Pkinase 2.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1956g00004 K06276 - cave:132164552 239.965