Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1949g00002 ATGCTAAACATGGGAAAACCTCCTGCCTTTGTTTTCCTCTTCTTACTTCATTGCTTCATAGCCTCTTTAGCTTGGAGTAAAACAAACATCACCACAGACAAATATGCACTTCTTGCTCTTAAATCCTCTATCACTTTTGATCCGTACAATTTTTTAGCTAATTGGTTGGTCTCTTCTTCTCCATGCAGTTGGGTTGGAGTGAGTTGCAGTATCCGCCATGGAAGGATCCATTCCTTGAATCTCAGTAAGATTGGATTGAAGGGCATCATAACTCCACAGTTGGGAAATCTCTCATTCCTTGTTGAACTTGATCTTAGTAAGAACAATTTTCATGGTCAAATACCAAAGGAGTTAGTTCAATTACGTAGATTGAGAGTACTCAACTTGAGTTTTAATGAATTGGATGGGAAAATTCCAACTTGGATGGGGGATTTATCAAGATTGCAACACTTGAGTCTTGGCAATAATAGTCTTACTGGATTCGTTCCAACATCTGTTTGCAACTTGTCAAGGTTACATGTCTTGGATTTGAGTATTAATTTAATTGAAGGGAGTATTCCACGTGAGGTGGGAAGACTCAAGAACTTGAGGACTTTATCACTTGTGGGTAACAACCTTTCAGGAACCATTCCTCAGACAATTTGCAACTTATCTTCACTTGAATTATTAGACTTGTCTTATAACTCTCTTTCAGGAGGCGTTCCTATTGACATTGGCAATCTTCCATCATTGTGGATCATGGACCTTTCATTCAATCAGTTTTCTGGTTCTATACCATCTTCAATATTTAATAGTTCTATGCTTCAGGTCATTAATCTTGGTGCAAATAACTTCTCTGGTGAAATTCCAGCATCTCTCTTCAGCAATATTTCTTCTTTAATAGAAGTATCTTTGGAGGAAAACAACTTAAATGGATCTCTCCCAGCATCACTTGGCAATAAAACACTGCTCAATTTCTTATTTCTACAATTCAATTCCTTCACAGGTGAAATTCCTCAGTCTCTTTTCAACATGCCTTCTATAAGAGAGTTTAGCCTTGGCATCAACCAATTATCTGGTACTTTGCCTGAACATCTGTGCTATGGACTCCCTTTACTTGAAGTCTTTGCGGTTGTTTCAAATCAATTAGAAGGAAACATTCCAAAATCAATAAGCAACTGCACATTTATGAAAGGATTATCCATGGGTGGCAACTTTTTTACAGGTTCTATACCCAAAGACATTGGCAATCTTGATAAACTTGAACAATTAGATTTGTCCACGAATCATTTAAGCGGACATATTCCTTCTAATATATTCAACATCTCAGCAATACAGCGACTGTACCTTGGGTTTAATTTCTTCTCCGGCCTTCTCCCATCATATTTAGGAAGTGGCCTTCCGAACCTGAAAGATTTTAGTGTGGAAGTGAACGAACTTTCTGGACAAATTCCAAAAAGCATAGTAAATGCTTCTAAACTCTATAAGTTATTTTTAAATGGGAATAAATTTAATGGAGAAGTACCCAATGTTATTGGGAATTTAACCAACTTGGTGGCATTATATCTGGGAGAGAATGATTTGAATGGGTTGATTCCTCCAACAGTTAACAAATTACAAAGCCTTCAACTTTTTGATGTCAGTAACAACAAAATGCAAGGGTCCATTGTCGAAGAACTTTGCCAAGTAAAAAGGTTGAATGTGTTGTATTTGGCTAATAACATGTTTTCAGGAACAATTCCAAGGTGCCTTGACAATCTTTCTAGTTTGCAAAAGTTGGACTTCAGCTCTAACAAATTGACTTCCCATATTCCCTCTTCTCTTTGGAATCTCAAAAATATTTTGGTCTTAGACTTATCTTCCAATGCAATTAGTGGAAGAATTCCACCTGAGGTGTCCAACTTGAGATCACTTGTAGAATTGAACTTGTCAAGAAATCAAATTTCAGGAAACATTCCTATAACGATAGGAGGCTTACAGAGCTTGCAAAACTTATCGTTGGCTCATAATAATTTACAAGGTTCTATACCAGAATCTTTTGGTGACATGTTAAGCATTGAGTTTTTAGATCTTTCTCAAAATTATTTGTCTAGTGAGATTCCAAAGTCATTAGAGTCACTTTCCCATTTGAAATACATTAATCTTTCCTACAATTTATTGCATGGAGAAATTCCATATGGTGGGCCTTTTAAAAATTTTAGAGCAGAATCTTTTGTTATGAATAAAGATCTTTGTGGGAAGCCCCAATTAGGAGTCCATCCATGTATTATAAGAGAGAAGCACAGGTCAGCTAAAATGATGCTTTTGATCAAATATTTATTGCCTATCATGGTCGCAATCATTTTGGTCGGTTCTTGCATAGTGTTTGTCAAGTGTAGGAAGCATCAGGTGGGTGAAAGGACCAATGGGGATTTCTTACATTTGGACCCACGCAGGATATCCTATTATGAACTTTTGCAAGGAACAAATAGATTTGATGAGAGTAATATTCTTGGTAAGGGAAGTTTTGGGTCTGTGTACCAAGCAATTCTTTCAAGTGGAAAAATAGTTGCTGTGAAAGTTTTCAACTTGGACTTGGAAGAAGCATTAAGGAGTTTTGATGTTGAATGTACTACGCTATGCAATTTACGTCATCGCAATCTTATTAAGATCATTAGCAGTTGCTCAAATAATGATTTCAAATCTCTAATAATGGAATTTATGCCAAATGGGAGTCTTGATAGATGGTTGTACTCCTATAACTATTGTTTAGACATCTTGCAAAGGTTAGACATAATGATTGATGTGGCATCTGCACTTGAGTATCTTCATCATGGTTCTTCTTCACCAGTGGTTCATTGCGATGTGAAGCCGAGCAATGTTTTGTTGGATAACAATATGGTAGCGCATCTCAGTGATTTTGGAATTGCCAAATTGTTGGGCTTTGGGCAATCAGAGATTTTTACCAGAACTTTGGCTACATTTGGTTATATGGCACCAGAGTATGGATCAAAAGGAGCTGTTTCTGTTAAAGGAGACATATATAGTTTTGGTATTTTGCTTATGGAAACACTCACAAGAAAAAAGCCAACAGATGAAATGTTTGGTCAAGGCTTAAATTTAAAAGATTGGATTGGCGAATCAATACCACATTCAATCATCAGTATTTTAGATGACAATCTGCTGGATAGACACAATCCAAATATTGGTAACATATTACCACATATTTCATCAATTTTTGAATTAGCCTTAAACTGTTGCATTGATGTACCTGAGGCACGACTTGATATGACAGATATTGTGGCTTCATTGGAAAAAATAAGGTCACGTCTATGCAAAGTGTTAGGCACCAGCCATTAG 3318 0.3653 MLNMGKPPAFVFLFLLHCFIASLAWSKTNITTDKYALLALKSSITFDPYNFLANWLVSSSPCSWVGVSCSIRHGRIHSLNLSKIGLKGIITPQLGNLSFLVELDLSKNNFHGQIPKELVQLRRLRVLNLSFNELDGKIPTWMGDLSRLQHLSLGNNSLTGFVPTSVCNLSRLHVLDLSINLIEGSIPREVGRLKNLRTLSLVGNNLSGTIPQTICNLSSLELLDLSYNSLSGGVPIDIGNLPSLWIMDLSFNQFSGSIPSSIFNSSMLQVINLGANNFSGEIPASLFSNISSLIEVSLEENNLNGSLPASLGNKTLLNFLFLQFNSFTGEIPQSLFNMPSIREFSLGINQLSGTLPEHLCYGLPLLEVFAVVSNQLEGNIPKSISNCTFMKGLSMGGNFFTGSIPKDIGNLDKLEQLDLSTNHLSGHIPSNIFNISAIQRLYLGFNFFSGLLPSYLGSGLPNLKDFSVEVNELSGQIPKSIVNASKLYKLFLNGNKFNGEVPNVIGNLTNLVALYLGENDLNGLIPPTVNKLQSLQLFDVSNNKMQGSIVEELCQVKRLNVLYLANNMFSGTIPRCLDNLSSLQKLDFSSNKLTSHIPSSLWNLKNILVLDLSSNAISGRIPPEVSNLRSLVELNLSRNQISGNIPITIGGLQSLQNLSLAHNNLQGSIPESFGDMLSIEFLDLSQNYLSSEIPKSLESLSHLKYINLSYNLLHGEIPYGGPFKNFRAESFVMNKDLCGKPQLGVHPCIIREKHRSAKMMLLIKYLLPIMVAIILVGSCIVFVKCRKHQVGERTNGDFLHLDPRRISYYELLQGTNRFDESNILGKGSFGSVYQAILSSGKIVAVKVFNLDLEEALRSFDVECTTLCNLRHRNLIKIISSCSNNDFKSLIMEFMPNGSLDRWLYSYNYCLDILQRLDIMIDVASALEYLHHGSSSPVVHCDVKPSNVLLDNNMVAHLSDFGIAKLLGFGQSEIFTRTLATFGYMAPEYGSKGAVSVKGDIYSFGILLMETLTRKKPTDEMFGQGLNLKDWIGESIPHSIISILDDNLLDRHNPNIGNILPHISSIFELALNCCIDVPEARLDMTDIVASLEKIRSRLCKVLGTSH 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1949g00002 1105 Gene3D Transferase(Phosphotransferase) domain 1 894 1100 - -
Pral1949g00002 1105 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Pral1949g00002 1105 SMART LRR_typ_2 241 265 IPR003591 -
Pral1949g00002 1105 SMART LRR_typ_2 145 168 IPR003591 -
Pral1949g00002 1105 SMART LRR_typ_2 411 435 IPR003591 -
Pral1949g00002 1105 SMART LRR_typ_2 628 651 IPR003591 -
Pral1949g00002 1105 SMART LRR_typ_2 217 240 IPR003591 -
Pral1949g00002 1105 SMART LRR_typ_2 580 604 IPR003591 -
Pral1949g00002 1105 SMART LRR_typ_2 169 193 IPR003591 -
Pral1949g00002 1105 SMART LRR_typ_2 652 675 IPR003591 -
Pral1949g00002 1105 SMART LRR_typ_2 676 700 IPR003591 -
Pral1949g00002 1105 SMART LRR_typ_2 508 532 IPR003591 -
Pral1949g00002 1105 SMART LRR_typ_2 338 362 IPR003591 -
Pral1949g00002 1105 SMART LRR_typ_2 97 121 IPR003591 -
Pral1949g00002 1105 Pfam Leucine rich repeat 558 617 IPR001611 GO:0005515
Pral1949g00002 1105 Pfam Leucine rich repeat 654 713 IPR001611 GO:0005515
Pral1949g00002 1105 Pfam Leucine rich repeat 195 254 IPR001611 GO:0005515
Pral1949g00002 1105 Pfam Leucine rich repeat 139 182 IPR001611 GO:0005515
Pral1949g00002 1105 SUPERFAMILY Protein kinase-like (PK-like) 800 1091 IPR011009 -
Pral1949g00002 1105 Gene3D Ribonuclease Inhibitor 285 453 IPR032675 -
Pral1949g00002 1105 Gene3D Ribonuclease Inhibitor 454 748 IPR032675 -
Pral1949g00002 1105 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 894 1101 - -
Pral1949g00002 1105 SUPERFAMILY RNI-like 78 401 - -
Pral1949g00002 1105 SMART LRR_sd22_2 580 606 - -
Pral1949g00002 1105 SMART LRR_sd22_2 193 219 - -
Pral1949g00002 1105 SMART LRR_sd22_2 145 171 - -
Pral1949g00002 1105 SMART LRR_sd22_2 411 437 - -
Pral1949g00002 1105 SMART LRR_sd22_2 628 660 - -
Pral1949g00002 1105 SMART LRR_sd22_2 532 555 - -
Pral1949g00002 1105 SMART LRR_sd22_2 676 702 - -
Pral1949g00002 1105 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 32 140 - -
Pral1949g00002 1105 Pfam Protein kinase domain 819 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1949g00002 1105 ProSiteProfiles Protein kinase domain profile. 818 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1949g00002 1105 FunFam Serine-threonine protein kinase plant-type 800 893 - -
Pral1949g00002 1105 FunFam Predicted protein 141 233 - -
Pral1949g00002 1105 SMART serkin_6 818 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1949g00002 1105 ProSitePatterns Protein kinases ATP-binding region signature. 824 846 IPR017441 GO:0005524
Pral1949g00002 1105 ProSitePatterns Serine/Threonine protein kinases active-site signature. 937 949 IPR008271 GO:0004672|GO:0006468
Pral1949g00002 1105 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 234 457 - -
Pral1949g00002 1105 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 458 751 - -
Pral1949g00002 1105 Gene3D Ribonuclease Inhibitor 30 185 IPR032675 -
Pral1949g00002 1105 SUPERFAMILY RNI-like 374 719 - -
Pral1949g00002 1105 PANTHER LEUCINE RICH REPEAT KINASE 2 392 1096 - -
Pral1949g00002 1105 Gene3D Phosphorylase Kinase; domain 1 799 893 - -
Pral1949g00002 1105 Gene3D Ribonuclease Inhibitor 186 284 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1949g00002 Pral-Chr1949 5318 12492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1949g00002 11 1096 Receptor kinase-like Gene Family AT5G46330 34.652 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral1949g00002 Pkinase 4.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1949g00002 - K13420 pcin:129285519 1049.27