Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1949g00001 ATGCTAAACATGGGAAAACCTCCTGCCTTTGTTTTCCTCTTCTTACTTCATTGCTTCATAGCCTCTTTAGCTTGGAGTAAAACAAACATCACCACAGACAAATATGCACTTCTTGCTCTTAAATCCTCTATCACTTTTGATCCGTACAATTTTTTAGCTAATTGGTTGGTCTCTTCTTCTCCATGCAGTTGGGTTGGAGTGAGTTGCAGTATCCGCCATGGAAGGATCCATTCCTTGAATCTCAGTAAGATTGGATTGAAGGGCATCATAACTCCACAGTTGGGAAATCTCTCATTCCTTGTTGAACTTGATCTTAGTAAGAACAATTTTCATGGTCAAATACCAAAGGAGTTAGTTCAATTACGTAGATTGAGAGTACTCAACTTGAGTTTTAATGAATTGGATGGGAAAATTCCAACTTGGATGGGGGATTTATCAAGATTGCAACACTTGAGTCTTGGCAATAATAGTCTTACTGGATTCGTTCCAACATCTGTTTGCAACTTGTCAAGGTTACATGTCTTGGATTTGAGTATTAATTTAATTGAAGGGAGTATTCCACGTGAGGTGGGAAGACTCAAGAACTTGAGGACTTTATCACTTGTGGGTAACAACCTTTCAGGAACCATTCCTCAGACAATTTGCAACTTATCTTCACTTGAATTATTAGACTTGTCTTATAACTCTCTTTCAGGAGGCGTTCCTATTGACATTGGCAATCTTCCATCATTGTGGATCATGGACCTTTCATTCAATCAGTTTTCTGGTTCTATACCATCTTCAATATTTAATAGTTCTATGCTTCAGGTCATTAATCTTGGTGCAAATAACTTCTCTGGTAATCTCCCAATAAATTTATGCTTTGGGCTTCCAAAAGTTGAAGTTCTTTATCTATTTGAAAATGACTTGTCTGGTGAACTGCCCCCCATATGGCATCAGTGCAAAGAATTAGTAGATCTAGAATTAAGCAGAAACGATTTCAATAGAGGAGTCATACCAAGTGACTTTGCAAATTTGACCAACCTCCAATATTTATATCTTGAGGACACCAACTTGGAAGGTGAAATTCCAGCATCTCTCTTCAGCAATATTTCTTCTTTAATAGAAGTATCTTTGGAGGAAAACAACTTAAATGGATCTCTCCCAGCATCACTTGGCAATAAAACACTGCTCAATTTCTTATTTCTACAATTCAATTCCTTCACAGGTGAAATTCCTCAGTCTCTTTTCAACATGCCTTCTATAAGAGAGTTTAGCCTTGGCATCAACCAATTATCTGGTACTTTGCCTGAACATCTGTGCTATGGACTCCCTTTACTTGAAGTCTTTGCGGTTGTTTCAAATCAATTAGAAGGAAACATTCCAAAATCAATAAGCAACTGCACATTTATGAAAGGATTATCCATGGGTGGCAACTTTTTTACAGGTTCTATACCCAAAGACATTGGCAATCTTGATAAACTTGAACAATTAGATTTGTCCACGAATCATTTAAGCGGACATATTCCTTCTAATATATTCAACATCTCAGCAATACAGCGACTGTACCTTGGGTTTAATTTCTTCTCCGGCCTTCTCCCATCATATTTAGGAAGTGGCCTTCCGAACCTGAAAGATTTTAGTGTGGAAGTGAACGAACTTTCTGGACAAATTCCAAAAAGCATAGTAAATGCTTCTAAACTCTATAAGTTATTTTTAAATGGGAATAAATTTAATGGAGAAGTACCCAATGTTATTGGGAATTTAACCAACTTGGTGGCATTATATCTGGGAGAGAATGATTTGAATGGGTTGATTCCTCCAACAGTTAACAAATTACAAAGCCTTCAACTTTTTGATGTCAGTAACAACAAAATGCAAGGGTCCATTGTCGAAGAACTTTGCCAAGTAAAAAGGTTGAATGTGTTGTATTTGGCTAATAACATGTTTTCAGGAACAATTCCAAGGTGCCTTGACAATCTTTCTAGTTTGCAAAAGTTGGACTTCAGCTCTAACAAATTGACTTCCCATATTCCCTCTTCTCTTTGGAATCTCAAAAATATTTTGGTCTTAGACTTATCTTCCAATGCAATTAGTGGAAGAATTCCACCTGAGGTGTCCAACTTGAGATCACTTGTAGAATTGAACTTGTCAAGAAATCAAATTTCAGGAAACATTCCTATAACGATAGGAGGCTTACAGAGCTTGCAAAACTTATCGTTGGCTCATAATAATTTACAAGGTTCTATACCAGAATCTTTTGGTGACATGTTAAGCATTGAGTTTTTAGATCTTTCTCAAAATTATTTGTCTAGTGAGATTCCAAAGTCATTAGAGTCACTTTCCCATTTGAAATACATTAATCTTTCCTACAATTTATTGCATGGAGAAATTCCATATGGTGGGCCTTTTAAAAATTTTAGAGCAGAATCTTTTGTTATGAATAAAGATCTTTGTGGGAAGCCCCAATTAGGAGTCCATCCATGTATTATAAGAGAGAAGCACAGGTCAGCTAAAATGATGCTTTTGATCAAATATTTATTGCCTATCATGGTCGCAATCATTTTGGTCGGTTCTTGCATAGTGTTTGTCAAGTGTAGGAAGCATCAGGTGGGTGAAAGGACCAATGGGGATTTCTTACATTTGGACCCACGCAGGATATCCTATTATGAACTTTTGCAAGGAACAAATAGATTTGATGAGAGTAATATTCTTGGTAAGGGAAGTTTTGGGTCTGTGTACCAAGCAATTCTTTCAAGTGGAAAAATAGTTGCTGTGAAAGTTTTCAACTTGGACTTGGAAGAAGCATTAAGGAGTTTTGATGTTGAATGTACTACGCTATGCAATTTACGTCATCGCAATCTTATTAAGATCATTAGCAGTTGCTCAAATAATGATTTCAAATCTCTAATAATGGAATTTATGCCAAATGGGAGTCTTGATAGATGGTTGTACTCCTATAACTATTGTTTAGACATCTTGCAAAGGTTAGACATAATGATTGATGTGGCATCTGCACTTGAGTATCTTCATCATGGTTCTTCTTCACCAGTGGTTCATTGCGATGTGAAGCCGAGCAATGTTTTGTTGGATAACAATATGGTAGCGCATCTCAGTGATTTTGGAATTGCCAAATTGTTGGGCTTTGGGCAATCAGAGATTTTTACCAGAACTTTGGCTACATTTGGTTATATGGCACCAGAGTATGGATCAAAAGGAGCTGTTTCTGTTAAAGGAGACATATATAGTTTTGGTATTTTGCTTATGGAAACACTCACAAGAAAAAAGCCAACAGATGAAATGTTTGGTCAAGGCTTAAATTTAAAAGATTGGATTGGCGAATCAATACCACATTCAATCATCAGTATTTTAGATGACAATCTGCTGGATAGACACAATCCAAATATTGGTAACATATTACCACATATTTCATCAATTTTTGAATTAGCCTTAAACTGTTGCATTGATGTACCTGAGGCACGACTTGATATGACAGATATTGTGGCTTCATTGGAAAAAATAAGGTCACGTCTATGCAAAGTGTTAGGCACCAGCCATTAG 3540 0.3655 MLNMGKPPAFVFLFLLHCFIASLAWSKTNITTDKYALLALKSSITFDPYNFLANWLVSSSPCSWVGVSCSIRHGRIHSLNLSKIGLKGIITPQLGNLSFLVELDLSKNNFHGQIPKELVQLRRLRVLNLSFNELDGKIPTWMGDLSRLQHLSLGNNSLTGFVPTSVCNLSRLHVLDLSINLIEGSIPREVGRLKNLRTLSLVGNNLSGTIPQTICNLSSLELLDLSYNSLSGGVPIDIGNLPSLWIMDLSFNQFSGSIPSSIFNSSMLQVINLGANNFSGNLPINLCFGLPKVEVLYLFENDLSGELPPIWHQCKELVDLELSRNDFNRGVIPSDFANLTNLQYLYLEDTNLEGEIPASLFSNISSLIEVSLEENNLNGSLPASLGNKTLLNFLFLQFNSFTGEIPQSLFNMPSIREFSLGINQLSGTLPEHLCYGLPLLEVFAVVSNQLEGNIPKSISNCTFMKGLSMGGNFFTGSIPKDIGNLDKLEQLDLSTNHLSGHIPSNIFNISAIQRLYLGFNFFSGLLPSYLGSGLPNLKDFSVEVNELSGQIPKSIVNASKLYKLFLNGNKFNGEVPNVIGNLTNLVALYLGENDLNGLIPPTVNKLQSLQLFDVSNNKMQGSIVEELCQVKRLNVLYLANNMFSGTIPRCLDNLSSLQKLDFSSNKLTSHIPSSLWNLKNILVLDLSSNAISGRIPPEVSNLRSLVELNLSRNQISGNIPITIGGLQSLQNLSLAHNNLQGSIPESFGDMLSIEFLDLSQNYLSSEIPKSLESLSHLKYINLSYNLLHGEIPYGGPFKNFRAESFVMNKDLCGKPQLGVHPCIIREKHRSAKMMLLIKYLLPIMVAIILVGSCIVFVKCRKHQVGERTNGDFLHLDPRRISYYELLQGTNRFDESNILGKGSFGSVYQAILSSGKIVAVKVFNLDLEEALRSFDVECTTLCNLRHRNLIKIISSCSNNDFKSLIMEFMPNGSLDRWLYSYNYCLDILQRLDIMIDVASALEYLHHGSSSPVVHCDVKPSNVLLDNNMVAHLSDFGIAKLLGFGQSEIFTRTLATFGYMAPEYGSKGAVSVKGDIYSFGILLMETLTRKKPTDEMFGQGLNLKDWIGESIPHSIISILDDNLLDRHNPNIGNILPHISSIFELALNCCIDVPEARLDMTDIVASLEKIRSRLCKVLGTSH 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1949g00001 1179 FunFam Leucine-rich repeat receptor protein kinase EMS1 189 285 - -
Pral1949g00001 1179 Gene3D Ribonuclease Inhibitor 287 364 IPR032675 -
Pral1949g00001 1179 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 968 1175 - -
Pral1949g00001 1179 SMART LRR_typ_2 145 168 IPR003591 -
Pral1949g00001 1179 SMART LRR_typ_2 750 774 IPR003591 -
Pral1949g00001 1179 SMART LRR_typ_2 582 606 IPR003591 -
Pral1949g00001 1179 SMART LRR_typ_2 169 193 IPR003591 -
Pral1949g00001 1179 SMART LRR_typ_2 339 363 IPR003591 -
Pral1949g00001 1179 SMART LRR_typ_2 485 509 IPR003591 -
Pral1949g00001 1179 SMART LRR_typ_2 97 121 IPR003591 -
Pral1949g00001 1179 SMART LRR_typ_2 241 265 IPR003591 -
Pral1949g00001 1179 SMART LRR_typ_2 654 678 IPR003591 -
Pral1949g00001 1179 SMART LRR_typ_2 217 240 IPR003591 -
Pral1949g00001 1179 SMART LRR_typ_2 412 436 IPR003591 -
Pral1949g00001 1179 SMART LRR_typ_2 702 725 IPR003591 -
Pral1949g00001 1179 SMART LRR_typ_2 726 749 IPR003591 -
Pral1949g00001 1179 SUPERFAMILY RNI-like 320 644 - -
Pral1949g00001 1179 Gene3D Ribonuclease Inhibitor 530 822 IPR032675 -
Pral1949g00001 1179 Gene3D Ribonuclease Inhibitor 365 529 IPR032675 -
Pral1949g00001 1179 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 188 - -
Pral1949g00001 1179 Pfam Protein kinase domain 893 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1949g00001 1179 SUPERFAMILY L domain-like 558 816 - -
Pral1949g00001 1179 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Pral1949g00001 1179 Gene3D Ribonuclease Inhibitor 32 184 IPR032675 -
Pral1949g00001 1179 Gene3D Ribonuclease Inhibitor 185 286 IPR032675 -
Pral1949g00001 1179 FunFam Serine-threonine protein kinase plant-type 874 967 - -
Pral1949g00001 1179 SUPERFAMILY L domain-like 31 325 - -
Pral1949g00001 1179 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 287 535 - -
Pral1949g00001 1179 Gene3D Phosphorylase Kinase; domain 1 873 967 - -
Pral1949g00001 1179 Gene3D Transferase(Phosphotransferase) domain 1 968 1174 - -
Pral1949g00001 1179 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1011 1023 IPR008271 GO:0004672|GO:0006468
Pral1949g00001 1179 ProSiteProfiles Protein kinase domain profile. 892 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1949g00001 1179 SMART serkin_6 892 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1949g00001 1179 SMART LRR_sd22_2 702 734 - -
Pral1949g00001 1179 SMART LRR_sd22_2 485 511 - -
Pral1949g00001 1179 SMART LRR_sd22_2 606 629 - -
Pral1949g00001 1179 SMART LRR_sd22_2 193 219 - -
Pral1949g00001 1179 SMART LRR_sd22_2 750 776 - -
Pral1949g00001 1179 SMART LRR_sd22_2 339 366 - -
Pral1949g00001 1179 SMART LRR_sd22_2 145 171 - -
Pral1949g00001 1179 SMART LRR_sd22_2 654 680 - -
Pral1949g00001 1179 Pfam Leucine rich repeat 632 691 IPR001611 GO:0005515
Pral1949g00001 1179 Pfam Leucine rich repeat 728 787 IPR001611 GO:0005515
Pral1949g00001 1179 Pfam Leucine rich repeat 195 254 IPR001611 GO:0005515
Pral1949g00001 1179 Pfam Leucine rich repeat 139 182 IPR001611 GO:0005515
Pral1949g00001 1179 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 536 825 - -
Pral1949g00001 1179 PANTHER LEUCINE RICH REPEAT KINASE 2 493 1170 - -
Pral1949g00001 1179 ProSitePatterns Protein kinases ATP-binding region signature. 898 920 IPR017441 GO:0005524
Pral1949g00001 1179 SUPERFAMILY Protein kinase-like (PK-like) 874 1165 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1949g00001 Pral-Chr1949 5318 12492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1949g00001 11 1170 Receptor kinase-like Gene Family AT5G46330 34.483 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral1949g00001 Pkinase 4.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1949g00001 - K13420 qsa:O6P43_031966 1114.37