Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1943g00005 ATGTCTGCTTCAGAATCTTCATCAGCTTCCCCTTTGGACCCAGGGCTTGTGAAACCCTCAATCCCTCTCGTCTCCTTTCTCGAACGCCTCCAAGAAACAGCAGTTAACACCTTTGGCAGATCTAACGTCGACCCAAAAAACTACGTTGACATGTCGTTGAAGTTCAGCTTGTCTGAGACAGAGGAGGCATTTGATAAGCTTGCTAGGTCTGCAAATGGCTTTGTACCAGCAAAAGAGTTGAATGATTTTATAGAAAAATACTTGGATGGAGCAGATGACGATATGGAGTACTACGAACCAGAGGATTACGTGGAAGAGCCAGAGGGATTCTTGCCCAAAGTTGAGCATCCAGAGGTGAGGGCATGGGCATTGAAAGTCCATTCCCTTTGGAAGAACTTGAGTCGCAGAGTTTCAAGTAGGGTCAAAAGTCATCCCCATTTGCATACTCTTCTTCCTCTGCCTGCTTCTTTCATCATCCCTGGTTCACGCTTTCGTGAGGTTTATTACTGGGATTCCTACTGGATAATCAGGGGCTTACTGGTGAGTAAAATGTACAAGACAGCCACTGGAATGATGACTAATCTTATTTCTTTGATAGAAGAATACGGGTTTGTGCCTAATGGTGCAAGAGCCTACTACACCCACAGGAGCCAGCCTCCCCTTTTAAGTGCTATGATTTATGAGATCTACAATGCCACTGGTGATATAGAGCTGGTCAAAAGATCGCTTCCTGCACTGAGGAAAGAGTATGAGTTTTGGAATTCAGAAATACATACGGTGACCATTGTGGACCCTCAAGGTTGTACTCACACCTTAAATCGTTACTATGCAATGTGGAATAAACCCAGGCCAGAGGGTTCAGTAAAGGACAAGAGATTTGCTTCCAAGTTCTCGGATGCTTCAGAAAAACAACACTTTTACCATGAAGTGGCTTCAACTTGTGAATCAGGATGGGATTTCAGCACAAGATGGTTGAGAGATCCGTTAGAATTTACATCAGTGGCTGCAACTTCTGTAATACCTGTTGACCTAAATGCATTTATTCTTGGGATGGAACTTAATATTGCATTTTTTGCAAAAGTTACTGGAGATAATAGCACTGCTCAGCACTTCCTGCAACTTTCTGATAGTAGAAAGAAGGCACTCAACTCTGTTTTCTGGAACGCAAACATGAAACAATGGCTTGATTACTGGCTCACAAATAGTACATGCCAGGGAGTTCAAGTCTGGGAAGATCAGCAGCAGAATCACAATGTATTTGCTTCCAACTTTGCTCCTTTATGGATGGAACCATTTTACTCAGATTCTTCGATCGTGGGTAGCGTTGTTGAAAGTCTCAAAACCTGTGGGCTGGTTCGTGCTGCTGGGGTTGCGACATCTTTGACAAATTCAGGACAACAATGGGACTTCCCAAATGGCTGGCCCCAAATTCAACATATGATAGTTGAAGGTCTGGTGAAATCTGGGTTGAAAGAAGCAGCTTCCCTGGGGGAAGAAATTGCAAGGAGATGGATCACAACCAACTATATGGCCTACAAGAAAACAGGTGTGATGCATGAAAAATATAATGTGGAGCATTGTGGAGAGTTTGGAGGTGGTGGACTATATGTGCCCCAGACTGGTTTTGGGTGGTCAAATGGAGTGGTGCTTGCTTTCTTGGAGGAGTTTGGATGGCCTCAAGATCGCGATATTGACTGTTCATTGATTTCCTCAGAAATTGACAACATTGGCAATTGA 1737 0.4381 MSASESSSASPLDPGLVKPSIPLVSFLERLQETAVNTFGRSNVDPKNYVDMSLKFSLSETEEAFDKLARSANGFVPAKELNDFIEKYLDGADDDMEYYEPEDYVEEPEGFLPKVEHPEVRAWALKVHSLWKNLSRRVSSRVKSHPHLHTLLPLPASFIIPGSRFREVYYWDSYWIIRGLLVSKMYKTATGMMTNLISLIEEYGFVPNGARAYYTHRSQPPLLSAMIYEIYNATGDIELVKRSLPALRKEYEFWNSEIHTVTIVDPQGCTHTLNRYYAMWNKPRPEGSVKDKRFASKFSDASEKQHFYHEVASTCESGWDFSTRWLRDPLEFTSVAATSVIPVDLNAFILGMELNIAFFAKVTGDNSTAQHFLQLSDSRKKALNSVFWNANMKQWLDYWLTNSTCQGVQVWEDQQQNHNVFASNFAPLWMEPFYSDSSIVGSVVESLKTCGLVRAAGVATSLTNSGQQWDFPNGWPQIQHMIVEGLVKSGLKEAASLGEEIARRWITTNYMAYKKTGVMHEKYNVEHCGEFGGGGLYVPQTGFGWSNGVVLAFLEEFGWPQDRDIDCSLISSEIDNIGN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1943g00005 578 PRINTS Glycosyl hydrolase family 37 signature 307 324 IPR001661 GO:0004555|GO:0005991
Pral1943g00005 578 PRINTS Glycosyl hydrolase family 37 signature 272 289 IPR001661 GO:0004555|GO:0005991
Pral1943g00005 578 PRINTS Glycosyl hydrolase family 37 signature 460 476 IPR001661 GO:0004555|GO:0005991
Pral1943g00005 578 PRINTS Glycosyl hydrolase family 37 signature 339 356 IPR001661 GO:0004555|GO:0005991
Pral1943g00005 578 PRINTS Glycosyl hydrolase family 37 signature 382 398 IPR001661 GO:0004555|GO:0005991
Pral1943g00005 578 PRINTS Glycosyl hydrolase family 37 signature 540 553 IPR001661 GO:0004555|GO:0005991
Pral1943g00005 578 PRINTS Glycosyl hydrolase family 37 signature 202 220 IPR001661 GO:0004555|GO:0005991
Pral1943g00005 578 SUPERFAMILY Six-hairpin glycosidases 38 560 IPR008928 GO:0005975
Pral1943g00005 578 Gene3D - 30 567 IPR012341 GO:0005975
Pral1943g00005 578 Pfam Trehalase 43 557 IPR001661 GO:0004555|GO:0005991
Pral1943g00005 578 PANTHER TREHALASE 20 567 IPR001661 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1943g00005 Pral-Chr1943 39968 44194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1943g00005 8 566 Trehalose Biosynthesis Gene Families AT4G24040 56.483 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1943g00005 K01194 - gmx:547539 860.136