Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1943g00004 ATGTCTGCTTCAGGTATCGCAGAATCTTCATCAGCTTCCCCTTTGGACCCAGGGCTTGTGAAACCCTCAATCCCTCTCGTCTCCTTTCTCGAACGCCTCCAAGAAACAGCAGTTAACACCTTTGGCAGATCTAACGTCGACCCAAAAAACTACGTTGACATGTCGTTGAAGTTCAGCTTGTCTGAGACAGAGGAGGCATTTGATAAGCTTGCTAGGTCTGCAAATGGCTTTGTACCAGCAAAAGAGTTGAATGATTTTATAGAAAAATACTTGGATGGAGCAGATGACGATATGGAGTACTACGAACCAGAGGATTACGTGGAAGAGCCAGAGGGATTCTTGCCCAAAGTTGAGCATCCAGAGGTGAGGGCATGGGCATTGAAAGTCCATTCCCTTTGGAAGAACTTGAGTCGCAGAGTTTCAAGTAGGGTCAAAAGTCATCCCCATTTGCATACTCTTCTTCCTCTGCCTGCTTCTTTCATCATCCCTGGTTCACGCTTTCGTGAGGTTTATTACTGGGATTCCTACTGGATAATCAGGGGCTTACTGGTGAGTAAAATGTACAAGACAGCCACTGGAATGATGACTAATCTTATTTCTTTGATAGAAGAATACGGGTTTGTGCCTAATGGTGCAAGAGCCTACTACACCCACAGGAGCCAGCCTCCCCTTTTAAGTGCTATGATTTATGAGATCTACAATGCCACTGGTGATATAGAGCTGGTCAAAAGATCGCTTCCTGCACTGAGGAAAGAGTATGAGTTTTGGAATTCAGAAATACATACGGTGACCATTGTGGACCCTCAAGGTTGTACTCACACCTTAAATCGTTACTATGCAATGTGGAATAAACCCAGGCCAGAGGGTTCAGTAAAGGACAAGAGATTTGCTTCCAAGTTCTCGGATGCTTCAGAAAAACAACACTTTTACCATGAAGTGGCTTCAACTTGTGAATCAGGATGGGATTTCAGCACAAGATGGTTGAGAGATCCGTTAGAATTTACATCAGTGGCTGCAACTTCTGTAATACCTGTTGACCTAAATGCATTTATTCTTGGGATGGAACTTAATATTGCATTTTTTGCAAAAGTTACTGGAGATAATAGCACTGCTCAGCACTTCCTGCAACTTTCTGATAGTAGAAAGAAGGCACTCAACTCTGTTTTCTGGAACGCAAACATGAAACAATGGCTTGATTACTGGCTCACAAATAGTACATGCCAGGGAGTTCAAGTCTGGGAAGATCAGCAGCAGAATCACAATGTATTTGCTTCCAACTTTGCTCCTTTATGGATGGAACCATTTTACTCAGATTCTTCGATCGTGGGTAGCGTTGTTGAAAGTCTCAAAACCTGTGGGCTGGTTCGTGCTGCTGGGGTTGCGACATCTTTGACAAATTCAGGACAACAATGGGACTTCCCAAATGGCTGGCCCCAAATTCAACATATGATAGTTGAAGGTCTGGTGAAATCTGGGTTGAAAGAAGCAGCTTCCCTGGGGGAAGAAATTGCAAGGAGATGGATCACAACCAACTATATGGCCTACAAGAAAACAGGTGTGATGCATGAAAAATATAATGTGGAGCATTGTGGAGAGTTTGGAGGTGGTGGACTATATGTGCCCCAGACTGGTTTTGGGTGGTCAAATGGAGTGGTGCTTGCTTTCTTGGAGGAGTTTGGATGGCCTCAAGATCGCGATATTGACTGTTCATTGATTTCCTCAGAAATTGACAACATTGGCAATTGA 1746 0.4387 MSASGIAESSSASPLDPGLVKPSIPLVSFLERLQETAVNTFGRSNVDPKNYVDMSLKFSLSETEEAFDKLARSANGFVPAKELNDFIEKYLDGADDDMEYYEPEDYVEEPEGFLPKVEHPEVRAWALKVHSLWKNLSRRVSSRVKSHPHLHTLLPLPASFIIPGSRFREVYYWDSYWIIRGLLVSKMYKTATGMMTNLISLIEEYGFVPNGARAYYTHRSQPPLLSAMIYEIYNATGDIELVKRSLPALRKEYEFWNSEIHTVTIVDPQGCTHTLNRYYAMWNKPRPEGSVKDKRFASKFSDASEKQHFYHEVASTCESGWDFSTRWLRDPLEFTSVAATSVIPVDLNAFILGMELNIAFFAKVTGDNSTAQHFLQLSDSRKKALNSVFWNANMKQWLDYWLTNSTCQGVQVWEDQQQNHNVFASNFAPLWMEPFYSDSSIVGSVVESLKTCGLVRAAGVATSLTNSGQQWDFPNGWPQIQHMIVEGLVKSGLKEAASLGEEIARRWITTNYMAYKKTGVMHEKYNVEHCGEFGGGGLYVPQTGFGWSNGVVLAFLEEFGWPQDRDIDCSLISSEIDNIGN 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1943g00004 581 SUPERFAMILY Six-hairpin glycosidases 41 563 IPR008928 GO:0005975
Pral1943g00004 581 Gene3D - 33 570 IPR012341 GO:0005975
Pral1943g00004 581 PANTHER TREHALASE 23 570 IPR001661 GO:0004555|GO:0005991
Pral1943g00004 581 Pfam Trehalase 46 560 IPR001661 GO:0004555|GO:0005991
Pral1943g00004 581 PRINTS Glycosyl hydrolase family 37 signature 310 327 IPR001661 GO:0004555|GO:0005991
Pral1943g00004 581 PRINTS Glycosyl hydrolase family 37 signature 342 359 IPR001661 GO:0004555|GO:0005991
Pral1943g00004 581 PRINTS Glycosyl hydrolase family 37 signature 385 401 IPR001661 GO:0004555|GO:0005991
Pral1943g00004 581 PRINTS Glycosyl hydrolase family 37 signature 205 223 IPR001661 GO:0004555|GO:0005991
Pral1943g00004 581 PRINTS Glycosyl hydrolase family 37 signature 463 479 IPR001661 GO:0004555|GO:0005991
Pral1943g00004 581 PRINTS Glycosyl hydrolase family 37 signature 275 292 IPR001661 GO:0004555|GO:0005991
Pral1943g00004 581 PRINTS Glycosyl hydrolase family 37 signature 543 556 IPR001661 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1943g00004 Pral-Chr1943 39968 44194 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1943g00004 11 569 Trehalose Biosynthesis Gene Families AT4G24040 56.483 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1943g00004 K01194 - gmx:547539 860.136