Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1943g00002 ATGGCTGACCTTCTATTCTTTTTTCGCAGACAAAATTTTCAACTTCATCTACTATGCTCACTAGCAATCATTGTGGCTGTCGCAGAATCTTCACCCGCTTGTTCTTTGGACCCTGACCTCGTGAAGCCCTCAACCCCACTTGTCTCCTTCCTCGAACGCGTACAGGAAACCGCTTTAGCCACTGTGGGAAAATCTAAATTCGATCCGAAAACATACGTGGATTTGCCCTTGAAGTTCAGCTTGTCGGAGACCGAGGAGGCATTTGATAAACTTGCTAGGTCTGCTAATGGCTCCGTACCAGCCGACGAGTTGAATGGTTTTATAGAAAGATACTTTGATGGTGCAGGGGACGACGTGGTATACTACGAACCAGAGGATTATGTAGAAGAGCCAGAGGGATTCCTGCCAAAAGTTGATGATCCAGAGGTGAGGGCATGGGCACTGAAGGTCCATTCCCTTTGGAAAAACCTGAGTCGCAGAGTGTCGAGTGGGGTCAAAAGCCATCCCCATTTGCATACTCTTCTTCCTCTGCCTGCTTCTTTCATCATTCCTGGCTCACGCTTTCACGAGGTTTATTACTGGGATTCCTACTGGATAATCAGGGGCTTACTGGCTAGCAAAATGTACAAGACAGCCACGGGAATCGTCACTAATCTTATTTCTTTAATAGAGGAATATGGATTTGTGCTTAATGGTGCAAGAGCCTACTACACCAACAGAAGCCAACCTCCCCTTTTAAGTTCTATGATTTATGAGATTTACAATAGCACCGATGATATAGAATTGGTCAAGAGATCGCTTCCTGCGCTATTGAAGGAATATGAATTTTGGAATTCAGACATACATAGGGTGACCATTGTGGATGTCCAAGGTTGTGCTCACACCTTAAATCGTTATTATGCAATGTGGAATAAACCTAGGCCAGAGTCTTCAACAAACGACAAGGCATTTGCTTCCAAGCTTTTGAATGTTTCAGAAAAGCAGCACTTTTACCGTGAAGTGGCTTCAGCTGCTGAATCAGGATGGGATTTTAGTACGAGATGGATGAGAGATCCGTCAGATTTTACCACATTGGCTACAACAGCAGTAATACCTGTTGACCTAAATGCTTATATACTTGGGATGGAACTTAATATTGCATATTTTGCTAAAGTTACCGGAGATAATAGTACTGCTCAGCACTTCCTGCAACTAGCTGATTCTAGAAAGAAGGCTTTCAACTCTGTTTTTTGGAACACAAACATGAAACAGTGGCTTGATTACTGGCTCACAAGTACTACATGTCAGGAAGCTCAAGTCTGGGATGCTCGCCAGCAGAATCACAATGTGTTTGCTTCCAATTTTGTCCCATTGTGGATGGAACCATTTTACTCAGACTCTTCAGTTGCGAGTAGCGTTGTTGAAAGCCTCAAAACTAGTGGGCTGCTTCGTGCTGCCGGAATTGCAACCTCTTTGACGAATTCTGGCCAACAATGGGATTTCCCAAATGGCTGGCCCCCACTTCAACATATGATGGTACAGGGTCTGATGAAATCTGGGTTGAAAGAAGCAGCCTCGTTAGCTGAAGAAATTGCAAGGAGATGGATCACAACCAACTATATTGCCTATAAGAAATCAGGGCTGATGCATGAAAAATATAATGTGGAGCATTGTGGGAAGTTTGGAGGTGGGGGTGAATATGTGCCTCAGACTGGTTTTGGATGGTCCAACGGAGTGGTGCTTGCTCTCTTGGAGGATTTTGGATGGCCTCGAGATCTTAATATTGACTGCTCAGATTAA 1779 0.4424 MADLLFFFRRQNFQLHLLCSLAIIVAVAESSPACSLDPDLVKPSTPLVSFLERVQETALATVGKSKFDPKTYVDLPLKFSLSETEEAFDKLARSANGSVPADELNGFIERYFDGAGDDVVYYEPEDYVEEPEGFLPKVDDPEVRAWALKVHSLWKNLSRRVSSGVKSHPHLHTLLPLPASFIIPGSRFHEVYYWDSYWIIRGLLASKMYKTATGIVTNLISLIEEYGFVLNGARAYYTNRSQPPLLSSMIYEIYNSTDDIELVKRSLPALLKEYEFWNSDIHRVTIVDVQGCAHTLNRYYAMWNKPRPESSTNDKAFASKLLNVSEKQHFYREVASAAESGWDFSTRWMRDPSDFTTLATTAVIPVDLNAYILGMELNIAYFAKVTGDNSTAQHFLQLADSRKKAFNSVFWNTNMKQWLDYWLTSTTCQEAQVWDARQQNHNVFASNFVPLWMEPFYSDSSVASSVVESLKTSGLLRAAGIATSLTNSGQQWDFPNGWPPLQHMMVQGLMKSGLKEAASLAEEIARRWITTNYIAYKKSGLMHEKYNVEHCGKFGGGGEYVPQTGFGWSNGVVLALLEDFGWPRDLNIDCSD 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1943g00002 592 PRINTS Glycosyl hydrolase family 37 signature 564 577 IPR001661 GO:0004555|GO:0005991
Pral1943g00002 592 PRINTS Glycosyl hydrolase family 37 signature 296 313 IPR001661 GO:0004555|GO:0005991
Pral1943g00002 592 PRINTS Glycosyl hydrolase family 37 signature 226 244 IPR001661 GO:0004555|GO:0005991
Pral1943g00002 592 PRINTS Glycosyl hydrolase family 37 signature 331 348 IPR001661 GO:0004555|GO:0005991
Pral1943g00002 592 PRINTS Glycosyl hydrolase family 37 signature 363 380 IPR001661 GO:0004555|GO:0005991
Pral1943g00002 592 PRINTS Glycosyl hydrolase family 37 signature 406 422 IPR001661 GO:0004555|GO:0005991
Pral1943g00002 592 PRINTS Glycosyl hydrolase family 37 signature 484 500 IPR001661 GO:0004555|GO:0005991
Pral1943g00002 592 ProSitePatterns Trehalase signature 2. 491 500 IPR018232 GO:0004555|GO:0005991
Pral1943g00002 592 Pfam Trehalase 67 581 IPR001661 GO:0004555|GO:0005991
Pral1943g00002 592 PANTHER TREHALASE 43 587 IPR001661 GO:0004555|GO:0005991
Pral1943g00002 592 Gene3D - 49 587 IPR012341 GO:0005975
Pral1943g00002 592 SUPERFAMILY Six-hairpin glycosidases 67 582 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1943g00002 Pral-Chr1943 26932 31389 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1943g00002 37 590 Trehalose Biosynthesis Gene Families AT4G24040 58.961 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1943g00002 K01194 - gmx:547539 880.167