Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1940g00011 ATGGAGGGTATTATTGTGAGAAGAGTAATTCCCTCAGATAATAGTTGCCTCTTCAATGCAATAGGGTATGTTATGGATCATGATAAAACTAAAGCTTCTGAGTTGAGACAGGTTATAGCTGCAACAGTAGCAAGTGATCCAGGGAAATATTCTGAAGCATTTCTTGGAAAGCCAAATGCAGACTATTGTGCCTGGATCCTTGACTCAGAGAAGTGGGGAGGTGCCATTGAGCTCTCAATATTAGCAGATTATTATGGACGTGAAATTGCAGCATATGATATTCAAACGACACGATGCGATGTGTATGGTCAGGAGAGAAAATATTCTGAAAGGGTCATGCTGATTTATGATGGTCTCCATTACGATGCATTAGCTATGTCTCCCTTTGAGGGTGCCCCTGAGGAGTTTGATCAGACCATATTCGCTGTACAGAAAGACAGAAGCATTGGACCTGTTGAGAGGCTTGCTCTTGATTTTGTTAAGGACCAACAAAGGAAACGAAGCTATACCGACACGGCCAGCTTCACACTCCGCTGCGGGATATGCCAAATTGGCGTAGTTGGTCAGAAGGAGGCAGTGGAGCATGCACAAGCAACTGGTCATGTTAACTTTCAAGAGTATAGATGA 627 0.4338 MEGIIVRRVIPSDNSCLFNAIGYVMDHDKTKASELRQVIAATVASDPGKYSEAFLGKPNADYCAWILDSEKWGGAIELSILADYYGREIAAYDIQTTRCDVYGQERKYSERVMLIYDGLHYDALAMSPFEGAPEEFDQTIFAVQKDRSIGPVERLALDFVKDQQRKRSYTDTASFTLRCGICQIGVVGQKEAVEHAQATGHVNFQEYR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1940g00011 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 - -
Pral1940g00011 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Pral1940g00011 208 Gene3D - 1 173 - -
Pral1940g00011 208 FunFam ubiquitin thioesterase OTU1 1 173 - -
Pral1940g00011 208 SUPERFAMILY Cysteine proteinases 7 124 IPR038765 -
Pral1940g00011 208 Pfam OTU-like cysteine protease 12 107 IPR003323 -
Pral1940g00011 208 CDD OTU_plant_OTU1_2-like 3 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1940g00011 Pral-Chr1940 62865 67025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1940g00011 1 208 C2H2 Transcription Factor Family AT1G50670 83.173 8.26e-132 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1940g00011 K13719 - zju:107432084 400.593