Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1937g00003 ATGGAGTGGGAGCTCCAAATTCCTTCATCTTCTGCAATCTTTTCCTTCTTCCTCTTCTTGTTAATGGTAGTTTACATATCCTGGAGATCGAAAACAAAAAATTCAAACTCAAAGTTGCCTCCTGGGCCACCTAAGGTACCCATCCTTGGTAATATGCACCAGATTGGAGCCATGCCTCATCAAACCCTAGCGAAATGGGCAAAGCAATATGGGTCTCTCATGCATCTAAAGCTTGGAGGACTTTCAGCCATAGTGGTATCTTCGCCTGAAATGGCCAAAGAAGTGATGAAGACCCATGATATCATCTTTGCAAATAGGCCTTTTGTTCTTGCTGCAGATATCATCACTTATGGCTCCAAGAGCATGAGCTTCTCTCCATATGGGAGTTACTGGAGGCAGATGAGGAAGATTTCCACGTCTGAGCTCCTAACGCCGAAGCGTGTGGAATCTTTTCGACCCATTCGTGAAGAAGAGGTTTCAGAACTTGTCAAGGAAATAGCTTTGAGTGAAGTGTCAGTGATCAATCTTACCAAGAAGATTAATTCAATGGCCTATGCCATGACCGCTAGAATAGCCTTTGGTGCGAAATCTAAAGATCAAGAAGCTTATATAGGACTCATGAAGGAAACTTTGAAGTTAGTGGGAGGGTTCTCTCTGGCTGATTTGTATCCATCCATTGGAGTTCTTCAAGTTTTGACAGGTCTGAGGTCCAAGGCTGAGAAGGTTCATCGAGAAATGGACAGGATACTTGGAAGCATTGTAAGCGATCACCAGGGCAGAGATGCACAAACAGAAAAAAACTATGAAAAAGAAGAAGATATAGTTGATATTCTGTTGAAGCTGCAGAAGCAGAACAACCCTGAACATCCTCTGTCTGATGAAATGATCAAAGCAACCATCTTGGACATATTTAGTGCTGGAAGTGGGACTTCATCAAAAACCATAGAGTGGGCAATGGCAGAGCTGATAAAAAACCCAAGGGAGATGGAGAAAGCACAATCTGAGGTAAGAAAGGTCTATGAAGGAAAAGGTTCTGTAGATGAAGCAAGTATTCATGAACTGAAGTACTTGAAGTCAGTCATCAAAGAAACATTGCGTCTGCACCCTCCAGTTCCACTGTTACTCCCAAGGGAATGCAGGGAGAGATGTGAGATTAACGGGTATGAGATTCTCCCTAAAAGCAAGGTGATGGTTAATGTATGGGCAATAGGGAGGAATCCTGAGTATTGGTTTGAATCTGAGAAATTTTACCCAGAAAGATTCGTTGATAGGTCAGTGGACTTCAAAGGAGCAGATTTTCAGCTCATTCCATTTGGCGCTGGAAGAAGGATGTGTCCTGGCGTAACATTTGGTGTTGCTAATGTTGAACTCTCACTTGCAAATTTGCTGTTCCATTTTGATTGGAAGATGCCTAATGGGGAAAATCCTGAAGATCTAGACATGAGTGAATCCTTTGGCATGTCTGTGAAGAAAAAATATGATTTGGAACTGATTCCTGTAAAGTATAGCTCATCTGTAATTTAA 1524 0.4219 MEWELQIPSSSAIFSFFLFLLMVVYISWRSKTKNSNSKLPPGPPKVPILGNMHQIGAMPHQTLAKWAKQYGSLMHLKLGGLSAIVVSSPEMAKEVMKTHDIIFANRPFVLAADIITYGSKSMSFSPYGSYWRQMRKISTSELLTPKRVESFRPIREEEVSELVKEIALSEVSVINLTKKINSMAYAMTARIAFGAKSKDQEAYIGLMKETLKLVGGFSLADLYPSIGVLQVLTGLRSKAEKVHREMDRILGSIVSDHQGRDAQTEKNYEKEEDIVDILLKLQKQNNPEHPLSDEMIKATILDIFSAGSGTSSKTIEWAMAELIKNPREMEKAQSEVRKVYEGKGSVDEASIHELKYLKSVIKETLRLHPPVPLLLPRECRERCEINGYEILPKSKVMVNVWAIGRNPEYWFESEKFYPERFVDRSVDFKGADFQLIPFGAGRRMCPGVTFGVANVELSLANLLFHFDWKMPNGENPEDLDMSESFGMSVKKKYDLELIPVKYSSSVI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1937g00003 507 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1937g00003 507 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1937g00003 507 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1937g00003 507 FunFam Cytochrome P450 71D8 32 499 - -
Pral1937g00003 507 SUPERFAMILY Cytochrome P450 38 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1937g00003 507 Gene3D Cytochrome P450 31 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1937g00003 507 PANTHER CYTOCHROME P450 71B11-RELATED 22 500 - -
Pral1937g00003 507 CDD CYP71-like 69 495 - -
Pral1937g00003 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Pral1937g00003 507 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1937g00003 507 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1937g00003 507 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1937g00003 507 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1937g00003 507 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1937g00003 507 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1937g00003 507 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1937g00003 507 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1937g00003 507 Pfam Cytochrome P450 40 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1937g00003 Pral-Chr1937 88262 90974 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1937g00003 16 500 Cytochrome P450 AT5G25180 43.002 1.30e-144 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1937g00003 - - gmx:100818000 718.768