Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1933g00002 ATGAAACTTGTGATGGGAAAGGAGATGGCATCACATTCTTCTTGGCAGAGCCTGGTTTTTCCGTTTCCATCTCCCCCATATGGCACAGGTATTGGCCTTGTGAGTCGCGCACGGATGCAGGATCAAAATTATCTCGACGAACATCCATTCGTAGCAGTGGAATTTGACACCTTTCCCAATACGGATGTGGGTGATCCACCCTATGATCACGTAGGAATCCTTGCAAAAACAATGCAGACTAATCATAGAACGCAAGGGTACACTATGAATGATGGTAGAAAGTATGATGCTGAGATTACCTATGAGTCTAGCTCTTTCCAGTTAAGTGTCATGTTTACAGGATATAAGGATAACATCAACATAAGACAAAATCATTCCCGTACGATTGATTTGGGAGACTACCTACCAGAAGAAGTTCAATTTGGAGTCTCTTCAGCCACAGGGTTACGGTTTGAGTTACATACACTGTGTTCATGGTCCTTTAATTCAAGTCTTGGAGTGCCCGGAGTGATGCAAAGGGGTGAAAACAATAATAAGCTTTCGGTCATTGGATTGAGCATTGGATCAGTTTTAGTGATTGGCGTGTTATGCATGGCTTGGTTTCTGATATGGAGGTCAAATTGTAGAGTGGAAGGACGTGATCGCTTGGATCTTTCCTTGGACGAAGATTTTGAATGTGTCGGACCAAAGAAGTTTTCCTATAACGAACTTGTAAGAGCCACAAATAACTTCTCAGAGGAACATAAACTCGGAGAAGGAGGTTTTGGTGGGGTCTACAAAGGATTTATCAGAGGCTTGAATTCTTATGTTGCAGTAAAGAAGGGTTCCCATGAATCTAGACAAGGAGTGAAGGAGTATGCCGCTGAAGTAAAGATCATCGGTCAACTGAGGCACAAGAATTTGGTGCAACTCATGGGTTGGTGCCACGAGAAGAATGATTTTCGACTTATTTATGAGTTCATGCCAAGTGGAAGCTTAGATTATCATCTATATCGAAGCAGAAACCTTTTGACATGGCCAGTCAGATACAGTATTGCTAAAGGCTTAGCCTCAGCAGTACTATACCTTCATGAAGAGTGGGAGCAGTGTGTGGTTCACAGGGACATAAAATCAAGCAATATTATGTTAGATTCAAATTTCGATACAAAGCTTGGAGATTTTGGGTTAGCAAGGCTCGTAGAACATGGAAAGCGCTCAGAAATAACAATTGTTGCAGGAACAAAAGGGTACATGGCTCCTGAATGTGCAACCATAAGCAAGGCAATAAAGGAGTCTGATATATACAGTTTTGGAATTGTTGCTCTAGAAATAACTTGTGGGAGAAAGCCAATTGACCACTATGCTCCCAATGACCAAGTCATGATGTTGGAATGGGTATGGGAACTATATGGCAAAGGTGAGCTTCTTGAAGCAGCTGATAAGAGGTTTGATGGAGATTTTGATGAGCAAGAACTTGAAAGGCTAATGATTCTTTGGCTATCGTGTGCTCACCCAGATTATACTATGAGGCCTACAGTTAGACAAGCACTTCATGTACTTAACTTTGAAGCTTCACTGCCTACTCTCCCACCTACAATGCCCAAACCAACATATGTTGGTCCATCCTTTTCTGATATTGGTTCTTCAATTTATTCATCTGCATATGCTAGTTCTTCTGCAACCAATGACTCTAGGCCTTCAACCAAGTGGAGGTCATACACTAAATCCTCACAATATTCATCCAATTCAGGCCACTCATCTGCAAAGGAAAAATTCTGA 1758 0.4181 MKLVMGKEMASHSSWQSLVFPFPSPPYGTGIGLVSRARMQDQNYLDEHPFVAVEFDTFPNTDVGDPPYDHVGILAKTMQTNHRTQGYTMNDGRKYDAEITYESSSFQLSVMFTGYKDNINIRQNHSRTIDLGDYLPEEVQFGVSSATGLRFELHTLCSWSFNSSLGVPGVMQRGENNNKLSVIGLSIGSVLVIGVLCMAWFLIWRSNCRVEGRDRLDLSLDEDFECVGPKKFSYNELVRATNNFSEEHKLGEGGFGGVYKGFIRGLNSYVAVKKGSHESRQGVKEYAAEVKIIGQLRHKNLVQLMGWCHEKNDFRLIYEFMPSGSLDYHLYRSRNLLTWPVRYSIAKGLASAVLYLHEEWEQCVVHRDIKSSNIMLDSNFDTKLGDFGLARLVEHGKRSEITIVAGTKGYMAPECATISKAIKESDIYSFGIVALEITCGRKPIDHYAPNDQVMMLEWVWELYGKGELLEAADKRFDGDFDEQELERLMILWLSCAHPDYTMRPTVRQALHVLNFEASLPTLPPTMPKPTYVGPSFSDIGSSIYSSAYASSSATNDSRPSTKWRSYTKSSQYSSNSGHSSAKEKF 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1933g00002 585 ProSitePatterns Legume lectins beta-chain signature. 51 57 IPR019825 -
Pral1933g00002 585 SMART serkin_6 244 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1933g00002 585 MobiDBLite consensus disorder prediction 549 585 - -
Pral1933g00002 585 FunFam Lectin-domain containing receptor kinase A4.3 321 533 - -
Pral1933g00002 585 SUPERFAMILY Concanavalin A-like lectins/glucanases 49 266 IPR013320 -
Pral1933g00002 585 SUPERFAMILY Protein kinase-like (PK-like) 228 535 IPR011009 -
Pral1933g00002 585 Gene3D Phosphorylase Kinase; domain 1 229 320 - -
Pral1933g00002 585 Pfam Legume lectin domain 27 166 IPR001220 GO:0030246
Pral1933g00002 585 Gene3D Transferase(Phosphotransferase) domain 1 321 533 - -
Pral1933g00002 585 MobiDBLite consensus disorder prediction 549 579 - -
Pral1933g00002 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
Pral1933g00002 585 FunFam L-type lectin-domain containing receptor kinase IX.1 229 320 - -
Pral1933g00002 585 ProSitePatterns Protein kinases ATP-binding region signature. 250 274 IPR017441 GO:0005524
Pral1933g00002 585 Pfam Protein kinase domain 245 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1933g00002 585 PANTHER - 27 524 - -
Pral1933g00002 585 ProSiteProfiles Protein kinase domain profile. 244 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1933g00002 585 Gene3D - 16 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1933g00002 Pral-Chr1933 8045 9802 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1933g00002 25 531 Receptor kinase-like Gene Family AT5G10530 45.802 1.52e-142 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral1933g00002 Pkinase 9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1933g00002 - - jre:109007094 592.038