Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1928g00004 ATGGACTTGAAACCAGCATCGAAGTCAAGCCAGAAGAAAAAGAACTTTAACCTCTGCCTCTGGTTTCGTGGCTTTTGCACTTTGCTTTGGTTCTTTGCAGAAACTTCGAAGGCGAAGCAAGCACAAATACCAATAGGCGTAGTGGTTGATCTCAAATCCTCAATCGGAAGTATGGCTGTGCGCTGCATCCAAATGGCTCATGATGACTTCTATAAACAGTATTCTCATTACCAAACAAGACTTGAACTTCGAATCAGCGATTCTAAGAATGATGCCGTCACTGCAGCATCTGCAGCTCTCGATTTGATAAAGAATGAAAACGTGCATGCAATTATCGGACCTTTATCTTCAGAACAAGCGAGTTTCGTAATACGACTTGGGCACAAATTTCAGGTGCCCATCGTCTCCTTTTCAGCCACAAGTCCATCTCTTCCTCCGCTCCGGAGCAAATTCTTCATAAGGACAGCACAAGATGATCGCTCACAGGTGCAGGCTATAGCTGCCATTGTTGAAGCTTACGGATGGCACGAAATCATCCCAATCTACGAAGACACCGAGTTTGGCAAGGGTCTGATCCCATACCTCACAGAGACCTTGGAGGAAGTTAACACCCGAGTGCCCTACAGAATTGCCATCGATCCGAATTCTGAGGAATATGAGATTTTAGAGGAGCTGAAGAAGCTCAATCAGAGTCGAAAAGGAATATGTCTTGTTCACATGACTAGTCTTGTTGGTCCCAAATTCTTCTCAGCAGTGAACAAAGCTGGAATGATGACAGAAGGGTATGGGTGGATAGTCACCGACGGGTTATCCAATGTGTTAGCCCCTCTGGGTCCGAAAGTGATGGATTCTATGCAAGGTATCGTGGGGGTAAGGCCAAGACTGGAAAAGTCTAGAGGGCTTACAATTTTCAGAGATAGATGGAAAGCTTGGTCAATTAAATCAGGTAGCGTGTCTTCTCCCTTAACCTTGTTTGGACTTTGGGCTTATGACACAGTTTGGCGATAG 1008 0.4524 MDLKPASKSSQKKKNFNLCLWFRGFCTLLWFFAETSKAKQAQIPIGVVVDLKSSIGSMAVRCIQMAHDDFYKQYSHYQTRLELRISDSKNDAVTAASAALDLIKNENVHAIIGPLSSEQASFVIRLGHKFQVPIVSFSATSPSLPPLRSKFFIRTAQDDRSQVQAIAAIVEAYGWHEIIPIYEDTEFGKGLIPYLTETLEEVNTRVPYRIAIDPNSEEYEILEELKKLNQSRKGICLVHMTSLVGPKFFSAVNKAGMMTEGYGWIVTDGLSNVLAPLGPKVMDSMQGIVGVRPRLEKSRGLTIFRDRWKAWSIKSGSVSSPLTLFGLWAYDTVWR 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1928g00004 335 PANTHER OS06G0188250 PROTEIN 19 334 - -
Pral1928g00004 335 Gene3D - 50 164 - -
Pral1928g00004 335 Gene3D - 165 322 - -
Pral1928g00004 335 PRINTS Metabotropic glutamate GPCR signature 162 178 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral1928g00004 335 PRINTS Metabotropic glutamate GPCR signature 111 137 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral1928g00004 335 PRINTS Metabotropic glutamate GPCR signature 143 162 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pral1928g00004 335 Pfam Receptor family ligand binding region 63 334 IPR001828 -
Pral1928g00004 335 FunFam Glutamate receptor 158 314 - -
Pral1928g00004 335 SUPERFAMILY Periplasmic binding protein-like I 39 334 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1928g00004 Pral-Chr1928 25665 26847 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1928g00004 13 331 Ion Channels AT5G27100 41.250 2.31e-84 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1928g00004 K05387 - qsa:O6P43_022275 356.681