Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1924g00001 ATGGCGGTGGGCAGTAGGAATTATATCGTGTGGGAAGATCTATCGGTGCAGGTTGCTGATGCTTTTGGAGAAGCCAATAATAAGAAGAAGGCGCTTCTTCATGCAGTCACAGGCTTCGCTCAGTCTGCTCGCCTCTTGGCTCTCTTGGGTCCTTCCGGCTCCGGCAAGACCACCCTCCTCCACTCTCTCGCGGGAACACTTGATGCGAATGCTTCAATGACCGGCAATATTCTAATCAATGGAAAGAAGAGAAAGTGGCATCACAGGGAGATTTCTTATGTTGCTCAAGAAGAGACCTTCCTAGGAACTTTGACGGTGAGAGAAACTCTCACGTACTCTGCGAAGATGAGGTTGATTTCAAAAATGACAAAAGAAGAGATAAGTAAGGTGGTTCAACAGACTATAATGGAAATGGGACTTGAAGATTGTGCTGATAATCATATTGGGAACTGGCATTTGCGAGGAATCAGTAATGGGGAAAAGAAGAGGCTGGCCATTGGCCTCGAGATTCTGACGCAACCTAATGTGTTATTTCTCGATGAGCCTACCACCGGACTTGACAGTGCCTCAGCTTTCTACGTAATCCACTCCCTGAGACAGATAGCTCATGGTGGAAAAATAATCATGTGTTCGATTCACCAACCGAGTAATGAAATCTTTCACCTGTTTGATGATTTGCTTCTGCTCTCAGGTGGAGAAACTGTTTATTTCGGCGAAGCAAAGATGGCTTTAGAGTTTTTTGCTAATGCAGGCTTCCCTTGTCCAACTACAAGAAACCCTCAGATCACTTCCTTCTGCAACATCATCAAATTCTGCAATGGACTTGAAAACATCAGAGAGTAG 843 0.452 MAVGSRNYIVWEDLSVQVADAFGEANNKKKALLHAVTGFAQSARLLALLGPSGSGKTTLLHSLAGTLDANASMTGNILINGKKRKWHHREISYVAQEETFLGTLTVRETLTYSAKMRLISKMTKEEISKVVQQTIMEMGLEDCADNHIGNWHLRGISNGEKKRLAIGLEILTQPNVLFLDEPTTGLDSASAFYVIHSLRQIAHGGKIIMCSIHQPSNEIFHLFDDLLLLSGGETVYFGEAKMALEFFANAGFPCPTTRNPQITSFCNIIKFCNGLENIRE 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1924g00001 280 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 6 260 - -
Pral1924g00001 280 SMART AAA_5 42 233 IPR003593 GO:0016887
Pral1924g00001 280 Pfam ABC transporter 41 183 IPR003439 GO:0005524
Pral1924g00001 280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 247 IPR027417 -
Pral1924g00001 280 Gene3D - 4 251 IPR027417 -
Pral1924g00001 280 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 16 256 IPR003439 GO:0005524
Pral1924g00001 280 Pfam ABC-2 type transporter 213 260 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1924g00001 Pral-Chr1924 1127 4764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1924g00001 40 211 Calmodulin-binding Proteins AT2G36910 27.322 2.36e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1924g00001 K05681 - gmx:100802207 384.8