Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1923g00001 ATGGGCACTGCGAGGAGGCAATTGAAGGTCATGCTATGGAAGAACTGGCTTCTCAAAATTCGTCATCCGTTCGCAACAAGTGCCGAGGTTTTGCTCCCAACTTTAGTGATGTTGCTGTTAATAGCTGTAAGGACTCGGGTTGATACACAAATTCATCCGGCGCAACCGCACATCCGAGAAGAGATGTATGTAGAAGTGGGCAGGGGTATTTCTCCTAGCTTCCAACAAGTTTTGGAAGTTTTGTTGGCCAAGGGAGAGTATATTGCCTTTGCCCCTAATACAACAAAGACTGAGCAAATGATAGACATAATGTCAATGAAATTTCCTCTCTTGAAGCTTGTCAGTAAAATATACAAAGATGAGGCAGAGCTGGAGACTTACATACGCTCAGATGTTTATGGTAGCTGCAATCAAGCAAGGAATTGCATATATCCAAAAATCAAAGGAGCAGTGGTATTTCATGAACAAGGTCCCGAGTCATTTGATTACAGCATACGCCTCAATCATACCTGGGCTTTCTCTGGTTTTCCTGATGTTAAAACCATAATGGATACAAATGGCCCTTTTGTCCGTGACTTGGAACTTGGTGTTAGTGCAATACCAACAATGCAGTACAGCTTCAGTGGGTTTTTGACTCTCCAGCAAGTTGTTGATTCATTTATAATATTCATGGCTCAGCAATCTGACATAACCCCTATCACGGAAAGTGTAGAGCATCCTCTACCACACTCCAATGATACCGATTTGTCTTTGAAAATTCCTTGGACTCAATTTAGTCCCGCTCACATACGAATGGCTCCCTTTCCCACTCGAGAGTACACTGATGATCAGTTCCAGTCAATTGTGAAGAATTTCATGGGGATTTTGTACTTATTGGGATTTCTGTATCCAATTTCTCGACTGATCAGTTATTCTGTGTTTGAGAAGGAACAGAAAATTAAGGAAGGGCTTTACATGATGGGCCTGAAAGATGGTGTGTTTTATCTCTCATGGTTTATAACATATGCTTTGCAGTTTGCAATCTCGTCTGGAATCATCACAGCTTGCACAATGGGGAATTTATTCAAGTATAGTGATAAGACACTGGTGTTTGCATACTTCTTCGTTTTTGGGCTTAGTGCAATTATGTTGTCATTTTTTATATCTACATTTTTCAAGCGGGCCAAAACAGCTGTAGCAGTTGGAACCCTTTCTTTCCTTGGTGCCTTTTTCCCGTATTACACAGTGTATGATGAGGGAGTCTCTATTGTCTTAAAGATTATTGCTTCTTTGCTTTCACCTACGGCTTTTGCTCTGGGGTCTATCAACTTTGCTGATTATGAGCGTGCTCATGTTGGACTTCGCTGGAGCAACATATGGCGGGATTCTTCTGGAGTGAATTTTTTGTTTTGTTTTTTGATGATGCTGCTTGATACACTGCTGTATTGTGCGATTGGTCTTTATCTTGATAAGGTTCTTCCAAGGGAGTATGGATCACAATATTCGTGGAACTTTATTTTCCAAAAGGGATTTTGGAGGAAGAAACAAGCTGTAAAACATTGTTTCTCCAATTCAGACATAGAAATTGCTGATAAGATTTCCAAGTCAAAGGAAAATTTTCTAGTAGAAAACGCTATCAAACCTGCTATAGAAGCAATAAGTTTGGACATGAAACAACAAGAGCTTGATGGCCGGTGCATTAAAATTAGGGATTTGCATAAAGTGTATGCTTCTAAAAGGGGGGCTTGCTGTGCTGTTAACTCATTACGGCTTACATTGTATGAAAATCAAATTCTCGCTCTTCTAGGGCACAATGGAGCTGGAAAAAGCACGACAATCTCAATGCTTGTTGGTCTTCTTCCTCCTACTTCAGGGGATGCGTTGGTGTTTGGAAAGAATATTTCAACTGACATTGATGAGATACGGAAGGTTTTGGGTGTCTGCCCCCAAAATGACATACTTTTTCCAGAATTGACTGTGAGAGAACATCTAGAAATATTTGCAGTATTAAAGGGTGTGGAGGAAGACTGTTTGAAGGATGTTGTTGCTAATATGGTAGATGAGGTAGGTTTAGCAGATAAAATTAACACTCTAGTGGGAGCTCTTTCTGGCGGCATGAGAAGGAAACTGTCTCTTGGAATTGCATTGATAGGGAACAGCAAGGTTATAGTTCTTGATGAG 2160 0.4065 MGTARRQLKVMLWKNWLLKIRHPFATSAEVLLPTLVMLLLIAVRTRVDTQIHPAQPHIREEMYVEVGRGISPSFQQVLEVLLAKGEYIAFAPNTTKTEQMIDIMSMKFPLLKLVSKIYKDEAELETYIRSDVYGSCNQARNCIYPKIKGAVVFHEQGPESFDYSIRLNHTWAFSGFPDVKTIMDTNGPFVRDLELGVSAIPTMQYSFSGFLTLQQVVDSFIIFMAQQSDITPITESVEHPLPHSNDTDLSLKIPWTQFSPAHIRMAPFPTREYTDDQFQSIVKNFMGILYLLGFLYPISRLISYSVFEKEQKIKEGLYMMGLKDGVFYLSWFITYALQFAISSGIITACTMGNLFKYSDKTLVFAYFFVFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGAFFPYYTVYDEGVSIVLKIIASLLSPTAFALGSINFADYERAHVGLRWSNIWRDSSGVNFLFCFLMMLLDTLLYCAIGLYLDKVLPREYGSQYSWNFIFQKGFWRKKQAVKHCFSNSDIEIADKISKSKENFLVENAIKPAIEAISLDMKQQELDGRCIKIRDLHKVYASKRGACCAVNSLRLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNISTDIDEIRKVLGVCPQNDILFPELTVREHLEIFAVLKGVEEDCLKDVVANMVDEVGLADKINTLVGALSGGMRRKLSLGIALIGNSKVIVLDE 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1923g00001 720 Pfam ABC-2 family transporter protein 231 480 IPR013525 GO:0016020|GO:0140359
Pral1923g00001 720 Pfam ABC transporter 580 720 IPR003439 GO:0005524
Pral1923g00001 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 557 720 IPR027417 -
Pral1923g00001 720 CDD ABC_subfamily_A 560 720 - -
Pral1923g00001 720 Gene3D - 547 720 IPR027417 -
Pral1923g00001 720 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 12 501 IPR026082 GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1923g00001 Pral-Chr1923 1353 10882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1923g00001 540 720 Calmodulin-binding Proteins AT2G36910 25.654 1.95e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1923g00001 K05643 - gmx:100803263 1179.85