Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1920g00001 ATGTGCCATCAACTCCCTTTACTTGAAGTCTTTGGAGTTGTTAACAATCAATTAGATGGAAGTATTCCAAAATCAATAAGTAACTGTACATCATTGCTAGCCTTATATTTGGATTTGAACTCGTTTTCAGGTTTTATACCCAAGGAGATAGCCAATCTTAATAAGCTTGAAGAGCTGGATTTCTCACCTGCTTTGGAATATCTTCATCATGGTTCTTCTACACCAGTTGTTCATTGTGACATAAAACCAAGTAATATATTGTTGGATGAAGATATGGTAGCCCACCTTAGTGATTTTGGTATTGCCAAATTGCTAGGTGAGGGACAGATGGAAATTTATACCAAGACTTTGGCTACAATAGGCTACATGGCACCAGAGTATGGATCACAAGGAATTGTTTCCTTTCAAGGAGATGTATATAGTTATGGTATTTTGTTGATGGAAATGCTTACAAGAAAGAAACCTACAGATGAGATGTTTGTTCAAGGTATGAGTTTGAAAGACTGGGTTAGCAAATCAATGCCTCATTCCATCATTAATATTCTAGATGTCAATTTACTGCCAAAAGATGATCAAAATATTGGCAGCATATTGTCACATATATCATCACTTTTTGAGTTGGCCTTGCATTGTTGCATTGATTTACCTGGGGCAAGAATTAACATGAAGGATGTAGTGGTAACACTGAACAGAATCAAGGCCTCGTTTATAAAAGATATTAGAGACACCCCTAAATACTTGAATAATTATTAG 753 0.3572 MCHQLPLLEVFGVVNNQLDGSIPKSISNCTSLLALYLDLNSFSGFIPKEIANLNKLEELDFSPALEYLHHGSSTPVVHCDIKPSNILLDEDMVAHLSDFGIAKLLGEGQMEIYTKTLATIGYMAPEYGSQGIVSFQGDVYSYGILLMEMLTRKKPTDEMFVQGMSLKDWVSKSMPHSIINILDVNLLPKDDQNIGSILSHISSLFELALHCCIDLPGARINMKDVVVTLNRIKASFIKDIRDTPKYLNNY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1920g00001 250 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 8 62 - -
Pral1920g00001 250 Pfam Protein kinase domain 64 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1920g00001 250 SUPERFAMILY Protein kinase-like (PK-like) 63 229 IPR011009 -
Pral1920g00001 250 Gene3D Ribonuclease Inhibitor 1 61 IPR032675 -
Pral1920g00001 250 SMART serkin_6 5 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1920g00001 250 Gene3D Transferase(Phosphotransferase) domain 1 62 245 - -
Pral1920g00001 250 SUPERFAMILY L domain-like 4 62 - -
Pral1920g00001 250 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 49 242 - -
Pral1920g00001 250 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1920g00001 250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1920g00001 Pral-Chr1920 7 4294 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1920g00001 4 62 Receptor kinase-like Gene Family AT3G47570 37.288 3.80e-06 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral1920g00001 Pkinase 9.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1920g00001 - K13420 pcin:129284864 327.405