Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1918g00005 ATGCAGAGTTATATAGTGTATATGAGGAGCCCTTCAAGTGGTGATGCCCCCAAGTCAATGCTTCACATGAGCATGCTCCAACAAGCCCTTGGCAGTGATGGAGCAGCAAATGCTCTTGTACACAGCTACAAGAGGTGTATCAACGGGTTCGTTGCGACGCTCAAGGAAGAAGATGTTCAGAAAGTTGCTGCAATGGAAGGAGTGGTTGCCGTGTTCCCAAATGGAAAGAAACATCTGCACACTACAAGATCATGGGACTTCATAGGATTTCCAGAAAAAGTGGAAAGATCAAGAACAGAAAGTGATATAATAATAGGAATACTTGACTCTGGAATCTGGCCTGACTCCCCCAGCTTCAATGACTCTGGACTTGGTCCCCCACCCTCCAAATGGAAGGGATCCTGCTATAATATCACTTGCAACAATAAAATCATTGGAGCAAAATATTTCCGAAGTGACAGAACATTTGGTGAAAATGATATCATATCGCCAATAGATTCTAAAGGCCATGGAACACACACTGCGTCAACAGCTGCTGGTGGGTTAGTGAGCTCAGCAAGCTTTTATGGTCTGGGATTCGGAACAGCAAGAGGAGGTGTGCCATCAGCAAGAATAGCAGCGTACAAGGTTTGTTGGTCCGATGGATGTCAAGACGCAGACATTCTTGCAGCTTTTGATGAAGCAATCTCTGATGGGGTCGACATAATCTCTGTCTCACTTGGAGGTCAATCAATTCAACATTATTTCAGTGATTCAATTGCCATTGGAGCTTTTCATGCTATGAAAAATGGGATCTTGACCTCCACTTCTGCCGGCAACGATGGTCCCAAACTTACGACCACCATTAGTGTGGCTCCTTGGACTCTTTCTGTGGCTGCCACTACCATGGATAGAAAGTTCCTCACCAAAATTCAGTTTGGGGATGATACGGTTTTTGAGGGAAGTTCAATAAATACCTTTGACTTGAATAACACTAAGTATCCTCTGGTCTATGGTGGGGATGTACCAAACACCCTTAAAGGCTATAATAGCTCTATATCCAGGCTTTGCTTAGAAGACTCAATGGACCAGAATTTAGTGAAAGGGAAAATAGTTGTTTGTGATGGCCATTATGGACCTAAAAAAATTGGACTTGCATCTGGTTCTACTGGAGTCATAATAAATTTTCAAGGAGAACTTCCTGATATTAGTTTTGCTTTTGCCTTGCCAGCATCCATCGTCAATCCAGTGAATAGTGACATCTTACGCCACATGAGAATCGGCCACAACATAACTGCAACCATATTGAAGAGCAGCCAGGCCAACAATACTTTAGCTCCTGTTGTAGCCTCCTTTTCTTCAAGGGGTCCCAACCTAGTTACACTTGACATTCTCAAACCGGATATAGCAGCACCGGGATCAAATATTTTGGCTGCGTGGTCTCCAAGTTCGCCTCCTTCTGGAGTAAAAGGAGACATAAGACAAGTAGATTATTCTATCGCTTCAGGGACATCAATGGCATGCCCTCATGTTACTGCGGTAGCTGCTTACATCAAATCCTTCCACCCTTCTTGGTCTCCTGCAGCAGTCAAGTCTGCAATTATGACCACAGCTACACCATTGGAGTCTCTAAAGAATGATGCTGAGTTTGCATATGGATCTGGCCATATAAATCCAACCAAGGCACTAAATCCTGGTTTGGTATACGATGCTAATGAAACCGACTACATCAACTTCCTATGTGGACAAGGTTACAATGACACATTGCTTCAAGTTGTAACCGGAGAAAGCAAAACTTGTTCTGGAGTCACCCATGGCAGTGTGTGGGATTTAAACTACCCTTCTTTTGCCGTCTCCACTACTTCTACTGAATTCGATACCCGAGTTTTCACAAGGACTGTCACCAATGTTGGGTCACCAACTTCCACATACGAAGCCACTGTGAGTGCTCCAGAAGGAATCGACATACAAGTGAACCCTCCAAGGTTGTCGTTCAGTTCCTTGGGACAGAAGCTGTCGTTTACTGTTAGTGTCAGTGGATTTGTAACTTCCTTAGCTTCTGCTTCTTTGGTCTGGAATGATGGCACCTACCAAGTGAGAAGCCCTATTGCAGTGTTTTTATATTATGTTGATGATAATTAA 2121 0.438 MQSYIVYMRSPSSGDAPKSMLHMSMLQQALGSDGAANALVHSYKRCINGFVATLKEEDVQKVAAMEGVVAVFPNGKKHLHTTRSWDFIGFPEKVERSRTESDIIIGILDSGIWPDSPSFNDSGLGPPPSKWKGSCYNITCNNKIIGAKYFRSDRTFGENDIISPIDSKGHGTHTASTAAGGLVSSASFYGLGFGTARGGVPSARIAAYKVCWSDGCQDADILAAFDEAISDGVDIISVSLGGQSIQHYFSDSIAIGAFHAMKNGILTSTSAGNDGPKLTTTISVAPWTLSVAATTMDRKFLTKIQFGDDTVFEGSSINTFDLNNTKYPLVYGGDVPNTLKGYNSSISRLCLEDSMDQNLVKGKIVVCDGHYGPKKIGLASGSTGVIINFQGELPDISFAFALPASIVNPVNSDILRHMRIGHNITATILKSSQANNTLAPVVASFSSRGPNLVTLDILKPDIAAPGSNILAAWSPSSPPSGVKGDIRQVDYSIASGTSMACPHVTAVAAYIKSFHPSWSPAAVKSAIMTTATPLESLKNDAEFAYGSGHINPTKALNPGLVYDANETDYINFLCGQGYNDTLLQVVTGESKTCSGVTHGSVWDLNYPSFAVSTTSTEFDTRVFTRTVTNVGSPTSTYEATVSAPEGIDIQVNPPRLSFSSLGQKLSFTVSVSGFVTSLASASLVWNDGTYQVRSPIAVFLYYVDDN 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1918g00005 706 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 80 IPR037045 -
Pral1918g00005 706 PRINTS Subtilisin serine protease family (S8) signature 166 179 IPR015500 -
Pral1918g00005 706 PRINTS Subtilisin serine protease family (S8) signature 495 511 IPR015500 -
Pral1918g00005 706 PRINTS Subtilisin serine protease family (S8) signature 100 119 IPR015500 -
Pral1918g00005 706 CDD Peptidases_S8_3 77 532 IPR034197 -
Pral1918g00005 706 SUPERFAMILY Subtilisin-like 79 560 IPR036852 GO:0004252|GO:0006508
Pral1918g00005 706 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 105 115 IPR023827 -
Pral1918g00005 706 Gene3D - 573 700 - -
Pral1918g00005 706 Gene3D - 297 435 - -
Pral1918g00005 706 ProSiteProfiles Serine proteases, subtilase domain profile. 84 556 - -
Pral1918g00005 706 Pfam Subtilase family 101 547 IPR000209 GO:0006508|GO:0008236
Pral1918g00005 706 Pfam Fibronectin type-III domain 603 698 IPR041469 -
Pral1918g00005 706 FunFam Subtilisin-like protease SBT1.5 102 307 - -
Pral1918g00005 706 ProSitePatterns Serine proteases, subtilase family, serine active site. 496 506 IPR023828 -
Pral1918g00005 706 Gene3D Peptidase S8/S53 domain 102 569 IPR036852 GO:0004252|GO:0006508
Pral1918g00005 706 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 698 IPR045051 -
Pral1918g00005 706 Pfam Peptidase inhibitor I9 3 80 IPR010259 -
Pral1918g00005 706 CDD PA_subtilisin_like 304 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1918g00005 Pral-Chr1918 33086 37467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1918g00005 2 699 Subtilisin-like Serine Gene Family AT5G59100 47.632 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1918g00005 - - qsa:O6P43_014382 895.575