Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1918g00004 ATGGGCTGGCACTCGCGCTATTGGCTGGCAAGAAATGTTCTTACGACATATAAGCTCGTAAGAGCTTTGGGAAACAAAATACAAGGGCTTAGTGCTGCTGCCGATAATGATTTTGAGAGGCCACTTCTGCTTGCGAATGAAATGCCTCTACCTGACACTGTAGGCATGGATTCAAAGCTAAAGAAGTTGATAGATTTCACTGGAGAAGACAATTCGGGTATTGTTGGGTTGTACGGCATGGGCGGGTCAGGGAAAACAACACTCATGAGAAAAGTATATAATAGTGTGATCGCTGATGTAACTACCAGACAAGATAATGCTCTGGTGATCTGGATTGACATGGCTGGAGGCTGTGATATAGAAAAAATTATTGATGATCTCCGCGAAAACTGCAAAATTGATAATGTGAATTGGGAGGGCAAAAGTAGAGATTACAAAGCGAAAGAAGTTTTCAATGAGCTGAAAGGGAAAAAATACATTTTATTTCTGGATGGTGCAGGTGGAGCACTAAATCTGGAAGACATTGGCGTTCCGCCTCCAAATGAAGCCAATCGATCAAAAATTTTTATCGCAACACGCTTTGAAAACGTGTGTGACCAAATGAAGGCTGAAAAGTTCAAAGTGGAATGTTTGGAGGAAAAAGATGCTCTTGATTTGTTGTGCAGAAGTGCAGGTATAAACTCAGAATCTGCTCTGGGCATGGTTGCACGTGAACTTAGTCAAGAATGCGAAGGATTCCCGCCTGCATTGGTAGCAGTTGGACAAGATGTGGCTGGCCTAAAGAAACTACAATCATGGAAGCATAACCTGAAGAAGCTCAAGAATTTCCCTTCCAAAGTGAAAGGCATGGAGAAGGATGTGTTCATTACTCTGAAGTCCAGCTACGATAGCCTTCCCACTACCATAGAAAAGAACTGCTTCTTGTATTTTGCTTTGTTCCCAAAGGGTGAAATCGTTTCTGTCCCTGATCTTATACGTCTGTGGATTGGAGAGGGATTACTTGGGAACCATGATAGCATACAAGATGCCATCAATCATGGCGTAGAAGTGGTTGAAAACCTAATGGTAGCATCTTTGTTGGAAGATTATGGAGATAATAGCGTCAAGATGCACAATGTGATTCGACAAATGGCATTATGGTTGGCTCGTGACCAAGATCAGAGGAGAGACAAAGTTCTGGTGCAAGATGAAGCATTGAGATCATCACAGGAATGTGATGGTGAGAAATGGAAGACTGTAGAGAAGATTTCAGTAAGTGACAACCATGCTCAAGAGGTCCTAACTTGGGATGGTCCTGTCTGCCCTAATGCTGAGACCTTAATAGTATGGTGCAACAAGGTACAGATAAAAGATTTCGAGAAGGTGGGATCCATGAGCAAATTAAAAGTTCTAAGTTTGAGGCACATTCAGGGGATAACCACACTGCCCAAAGAAATAGGTCGACTAATTCACTTGGAATATCTGGACTTGTCATATCTCAATATTCAGGAAAATCTTCCGGTAGAGATGATCAACTTGACGAGATTGAGAGTGTTTCTCCTAGAACACGTTCATTTCAGTCTTGAAGTCATCTCTAAAGAGGTTATATCTTGTCTTAAGAGTTTGATGGTGTTCTCGTTTTGGCGAGAGATAAGGTCCTCAGAAACCACAAATGAGGACCCTTCGTCATCCACCTCGTTCACTTCGCCATATTTACAAGAGAAATCATTTCTGGAGCGCTTAGAGCAGCTACCATTCTTGGAGGACATAAGCCTCACCTTAGAGACTCCCTCAGGCATCAACAAATTACTTAGCTCAGACAAGTTGCGGCATTGCATCAGAAATGTTGGATTAATTCATCAACAAAATGAGGAGACTACTGAAACTATCAACGCACCAGTAACACAATCTCTGTCAAAAATGGAACTTTTGGAGGTGATTCATCTGGTTGCATGGCGACACTGGTTGGAAGAGTCGTCCCTTGTTGATCATCAGATTGATATATTTCGGCAGCTTAGTGAGGTCCAAATTTTGGACAGTTTTTCAGTAACTCATTTGACATGGCTCAGGTTTGCTCCAGTCCTTCGTTCTCTCAAATTAGTTAATTGTCTTTCACTCGAAGAAGTGATTATGGAAATCGAAGAAGATGTGGATAGCGTATTTGGAAATTTAGATTCGATGGTTTTGACAAGGCTGCCAAGACTATGGAGCGTCTGCAAGAAAACGTTGCCTTTTCCTAAACTTATTGTCATGGAGATAACTGGATGCAATAATTTGAACAAGCTTCCTCTTGATCGTAACTCTGCAACAAATACTTTGAAGCATATAAGAGGAGAAACACGATGGTGGGACAATTTAGAGTGGGAGGACTCAATGGCAAAGGAATTTTTTCAGGCTAAATTTACTGATATCAACAATTCTTAA 2403 0.4153 MGWHSRYWLARNVLTTYKLVRALGNKIQGLSAAADNDFERPLLLANEMPLPDTVGMDSKLKKLIDFTGEDNSGIVGLYGMGGSGKTTLMRKVYNSVIADVTTRQDNALVIWIDMAGGCDIEKIIDDLRENCKIDNVNWEGKSRDYKAKEVFNELKGKKYILFLDGAGGALNLEDIGVPPPNEANRSKIFIATRFENVCDQMKAEKFKVECLEEKDALDLLCRSAGINSESALGMVARELSQECEGFPPALVAVGQDVAGLKKLQSWKHNLKKLKNFPSKVKGMEKDVFITLKSSYDSLPTTIEKNCFLYFALFPKGEIVSVPDLIRLWIGEGLLGNHDSIQDAINHGVEVVENLMVASLLEDYGDNSVKMHNVIRQMALWLARDQDQRRDKVLVQDEALRSSQECDGEKWKTVEKISVSDNHAQEVLTWDGPVCPNAETLIVWCNKVQIKDFEKVGSMSKLKVLSLRHIQGITTLPKEIGRLIHLEYLDLSYLNIQENLPVEMINLTRLRVFLLEHVHFSLEVISKEVISCLKSLMVFSFWREIRSSETTNEDPSSSTSFTSPYLQEKSFLERLEQLPFLEDISLTLETPSGINKLLSSDKLRHCIRNVGLIHQQNEETTETINAPVTQSLSKMELLEVIHLVAWRHWLEESSLVDHQIDIFRQLSEVQILDSFSVTHLTWLRFAPVLRSLKLVNCLSLEEVIMEIEEDVDSVFGNLDSMVLTRLPRLWSVCKKTLPFPKLIVMEITGCNNLNKLPLDRNSATNTLKHIRGETRWWDNLEWEDSMAKEFFQAKFTDINNS 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1918g00004 800 Gene3D - 44 210 IPR027417 -
Pral1918g00004 800 PANTHER DISEASE RESISTANCE PROTEIN RP 54 737 IPR044974 GO:0006952
Pral1918g00004 800 Gene3D - 295 379 IPR036388 -
Pral1918g00004 800 Gene3D Ribonuclease Inhibitor 384 787 IPR032675 -
Pral1918g00004 800 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 310 IPR027417 -
Pral1918g00004 800 FunFam Probable disease resistance protein At1g61300 39 206 - -
Pral1918g00004 800 Gene3D - 211 294 IPR042197 -
Pral1918g00004 800 SUPERFAMILY L domain-like 369 757 - -
Pral1918g00004 800 PRINTS Disease resistance protein signature 74 89 - -
Pral1918g00004 800 PRINTS Disease resistance protein signature 456 472 - -
Pral1918g00004 800 PRINTS Disease resistance protein signature 243 257 - -
Pral1918g00004 800 PRINTS Disease resistance protein signature 153 167 - -
Pral1918g00004 800 FunFam Probable disease resistance protein At1g63360 295 380 - -
Pral1918g00004 800 Pfam NB-ARC domain 62 296 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1918g00004 Pral-Chr1918 18961 21363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1918g00004 75 392 WRKY Transcription Factor Family AT5G45050 26.154 7.19e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1918g00004 - K13459 pcin:129315455 616.69