Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1910g00006 ATGTCGTCGCCGGAACCCTCCATCCTCGCCGCCAATGACGACTGTGCTGATGCGGGCACCACCTCTTTCGTCACCGACCTCAGCATCGGCTCCTTATTCACCAAGGCACTCCTCATCCTCCTCTTCGTCTTCGTCGTTATCCGCGTGTCTATCACCATTTTCCGCTCGTGCCGCGGCGGCAACCATCAACAAAGCAGCCACCGAGGTGACGGTGTCCCTGACTCATCTGGTAATAATCCCGACGGCCATCACGACGAAGAGAACCCCGTCCACAATGGTGCGGCGGGAATAACCCCTAATAGAGTCCTTGAAGTTGAAGCCGTCATCAGCTCGTACCCGAGTTTCTTGTACTGTCATGCGAAAGCCGACGAACGAAACAACACGACATGTCCGATTTGCATGTGCGAGTATTTGGAGTCGGAGATGATAAGGATGATGCCAAAATGTGGGCATTACTTTCACCTTATATGCCTCGACGAATGGCTGAGGATTAATTGGTCGTGTCCTGTGTGTCGCGACTCGCCGTCGTTGCAACATGCCCCGACATCGTCGTCGCCGCAGGCCACGCCGTCGTTGCAACAGCCCACGACGTCGTCTTCACAGGACGCGCCGTCGTCGTCGTCCTGCGACTAA 633 0.5592 MSSPEPSILAANDDCADAGTTSFVTDLSIGSLFTKALLILLFVFVVIRVSITIFRSCRGGNHQQSSHRGDGVPDSSGNNPDGHHDEENPVHNGAAGITPNRVLEVEAVISSYPSFLYCHAKADERNNTTCPICMCEYLESEMIRMMPKCGHYFHLICLDEWLRINWSCPVCRDSPSLQHAPTSSSPQATPSLQQPTTSSSQDAPSSSSCD 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1910g00006 210 MobiDBLite consensus disorder prediction 174 210 - -
Pral1910g00006 210 MobiDBLite consensus disorder prediction 59 73 - -
Pral1910g00006 210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 98 176 IPR013083 -
Pral1910g00006 210 MobiDBLite consensus disorder prediction 59 95 - -
Pral1910g00006 210 PANTHER RING-H2 FINGER PROTEIN ATL67 16 191 IPR044289 GO:0016567|GO:0016740
Pral1910g00006 210 Pfam Ring finger domain 129 172 IPR001841 -
Pral1910g00006 210 SUPERFAMILY RING/U-box 120 177 - -
Pral1910g00006 210 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
Pral1910g00006 210 SMART ring_2 130 171 IPR001841 -
Pral1910g00006 210 MobiDBLite consensus disorder prediction 176 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1910g00006 Pral-Chr1910 16471 17103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1910g00006 106 175 C3H Transcription Factor Family AT2G35910 47.143 1.59e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1910g00006 - - pcin:129290900 247.284