Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1910g00005 ATGTCCTCCGCCGCCTCGGCCTCCTCCTTCCTCTCCAACATCGGCCTCGGCTACTCCATCGCCATCGCCCTTGCCTTCCTCTTTCTCCTCTCCACCCTCCTCCTCTCTTCCTACCTCTGCTGCCGGCCTCACCCTCCCTCCCCTCCTCCTCCCCCTCCCCCCGACGGAATCATTCTCCCCCGCATCATCTTCGTCGCCGACGAAGACCACAACCGTGATGATAACTCCGTCTCCCTCGGTCTCGCTCCTAATGTTATCAACTCCTACCCGAGGTTCTCATACACCAAGGACGCTCTCGCCGCCGCCGACGCCGCGGATAACAATATCACGTGCTCCATCTGCTTGTGCGAGTACAAGGACTCCGAGATGCTGAGGATGATGCCGGAGTGCCGCCATTTCTTCCACCTCGTCTGCCTCGATGCATGGCTCAAGCTCAACGGCTCCTGCCCCGTCTGCAGAAACTCTCCGCTTCCTACGCCGATCTCAACTCCGATCTCGACGCCGTTGCAGGAGGTGGTGCCTCTATCTCAGTACGCGGCTGATCGGAGGCGCAGCAGTTGA 561 0.6061 MSSAASASSFLSNIGLGYSIAIALAFLFLLSTLLLSSYLCCRPHPPSPPPPPPPDGIILPRIIFVADEDHNRDDNSVSLGLAPNVINSYPRFSYTKDALAAADAADNNITCSICLCEYKDSEMLRMMPECRHFFHLVCLDAWLKLNGSCPVCRNSPLPTPISTPISTPLQEVVPLSQYAADRRRSS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1910g00005 186 SMART ring_2 111 152 IPR001841 -
Pral1910g00005 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 157 IPR013083 -
Pral1910g00005 186 PANTHER RING-H2 FINGER PROTEIN ATL67 4 185 IPR044289 GO:0016567|GO:0016740
Pral1910g00005 186 SUPERFAMILY RING/U-box 105 158 - -
Pral1910g00005 186 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Pral1910g00005 186 Pfam Ring finger domain 110 153 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1910g00005 Pral-Chr1910 10340 11272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1910g00005 15 177 C3H Transcription Factor Family AT5G06490 36.207 1.02e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1910g00005 - - pvy:116141324 223.787