Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1909g00001 ATGGCAGCGGATTCGTCTCTCGAGGGTTTCACACTTGATCCTGCTAAATGCAGTAAGTTGAGTATGGAGGAAAAAAGAGAACTTGTATACGAAATATCTAAGTGGCCAAATGATGCATTGGAAATGCTACAGTCGTGGAGCCGTCAAGAGATCTTACAAATCCTTTGTGCTGAGATGGGGAAAGAGAGGAAGTATACTGGATTAACAAAGGTGAAAATTATAGAAAACCTTCTGAAAATTGTTTCTGAAAAGAAATCTGGAGGCCAGGAAATTGCAACAGACCTTGAACCACATTCTTCTACTTCACATGGTCAGAAACCTGCTAAAAGGCAAAGGAAAAATGAGAATCCGTCTCGATTACCTGTTCCAGTAAATGACGTTTCTGTCAACAATGGAGTTGGAGATGTAACTAGTATTTCGTACTGCAAAAACACAGCTTGCAAAGCCGCCTTAAGTGAAGCAGATGTGTTTTGTAAAAGATGCTCATGCTGCATTTGTCATAAATATGATGACAACAAAGATCCTAGCCTTTGGTTAATATGTGGCTCTGAGCCTCCATTTCTTGGTGTTTCTTGTGGCTTGTCATGTCATCTTGAGTGTGCTTTAAAGCATGATAATTCTGGCATTGCCAAAGATGGAAAACGTCCCAAGCTTGATGGAAGCTTCTACTGCATCTCATGTGGGAAAGTGAATGATTTGCTCGGATGCTGGAGAAAGCAACTGATGGTGGCAAAGGATACTAGACGTGTTGACATACTATGCTACCGTGTTTCCTTGAGCCAAAGAATTTTACAAGGGACTGAAAAGTATAAAAAACTTTATGAAATTGTTAACGAGGCGGTGAGGAAACTTGAACCTGAATTAGGCCCATTAACTAGTTCACCAGTGAAGATTGGTAGGGGCATTGTGAACAGACTTTCGTCAGGGCCAGAGGTTCAGAAACTATGTGGTTTGGCTTTGGAATCATTAGATTCTTTTCTTTCTAAAGGGGTTGTGCCTCCATCACCTAATCCAACAACTCAAGATGCAAATTTGATTGCAACAAATATGGTGAGATTCGAAGATGTCAGAGATACATCCCTGACTGTGATTTTGGGTTCTGAAGATCCTTTGGAAGAAAATATCAGTGGCTATTCCCTTTGGCATCGCAAGGCTCTTGATGTGGAATATCCAGTTGAACCTACTTGTACTTTGGTTCTACCTGACCGAAGTTTCAATATAAGGAGTTTAATTCCAGCTACAAAATATAGTTTCAAAGTTGTTTCCTATAATGGCACAAGGGAGATGGGTACGTGTGAGGTACAAATCTCAACAGAGCCTGGCGAGTATGAAGTTCCTAACTGTTCAGCAACGGAAAGAAGTCAGAGCCCAGTAACCAACTGTAGCAGCCATTCCAATCCTTCATCAGTGGAAGATGAAACCAACAACAGCAATCCATTTAGTGATCAGACCGATGATCGGGCAGATAATTATCTTGCTTATAGCAAGGATGCTGACAAGCTTGCTTCTGAAAATTTATCCAATGATGTTATTAAATGTTCCAACACCGTTGGAGGTGGACTGCCTGCTGATGCAGATTCTCTGTCAGAAAAGCAACGTGGCAGAGGCTTGGCTGTAACCATACCTGGTTCTGAAATGCTAAAGCTTGAAAACAACCATTCACCAGAGGGACAAATCACTGAGGACTTGAGCACTGACGATGGGTTGAATTCCCCTGTTCAGATTGGGAGGGAATGTGTGCCACTGGTGCGTAGCTCGGAAGCAAGCTTGCCTATTACTCCTTGCAAGTTGGAAATACTTAAGGACGGGCCAGGAAGAAGTGGTAGATCCAAGTCCTCAGGCAAGGATCAAGAGAATGGTTCCGGGAAGAGAGAGGGTCCTCAGGATGGAAGCACATCTAAGAAGAGAGCTGAACAGAGGCAAGATGAGGTTTTTGTTGCCAATGGGTATTCGGATCGGGATTTTGAGTATTACGTGAAAGTGATCAGATGGCTTGAGTGTGAAGGACACATAGAAAAGAACTTCAGACAGAAATTTTTGACTTGGTACAGCTTGAGAGCCACGCCACAGGAAGTAAAGATTGTGAAAGTATATATTGATACATTTCTTGATGATCCACCTTCTCTTGCTGAGCAGCTTGTGGACACCTTCTCAGAATGCATATCAAACAAGAGACCATCTGTTGTGCCAGCTGGGTTCTGCATGAAGCTCTGGCATTGA 2220 0.4257 MAADSSLEGFTLDPAKCSKLSMEEKRELVYEISKWPNDALEMLQSWSRQEILQILCAEMGKERKYTGLTKVKIIENLLKIVSEKKSGGQEIATDLEPHSSTSHGQKPAKRQRKNENPSRLPVPVNDVSVNNGVGDVTSISYCKNTACKAALSEADVFCKRCSCCICHKYDDNKDPSLWLICGSEPPFLGVSCGLSCHLECALKHDNSGIAKDGKRPKLDGSFYCISCGKVNDLLGCWRKQLMVAKDTRRVDILCYRVSLSQRILQGTEKYKKLYEIVNEAVRKLEPELGPLTSSPVKIGRGIVNRLSSGPEVQKLCGLALESLDSFLSKGVVPPSPNPTTQDANLIATNMVRFEDVRDTSLTVILGSEDPLEENISGYSLWHRKALDVEYPVEPTCTLVLPDRSFNIRSLIPATKYSFKVVSYNGTREMGTCEVQISTEPGEYEVPNCSATERSQSPVTNCSSHSNPSSVEDETNNSNPFSDQTDDRADNYLAYSKDADKLASENLSNDVIKCSNTVGGGLPADADSLSEKQRGRGLAVTIPGSEMLKLENNHSPEGQITEDLSTDDGLNSPVQIGRECVPLVRSSEASLPITPCKLEILKDGPGRSGRSKSSGKDQENGSGKREGPQDGSTSKKRAEQRQDEVFVANGYSDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVKIVKVYIDTFLDDPPSLAEQLVDTFSECISNKRPSVVPAGFCMKLWH 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1909g00001 739 Pfam Fibronectin type III domain 351 426 IPR003961 GO:0005515
Pral1909g00001 739 MobiDBLite consensus disorder prediction 551 570 - -
Pral1909g00001 739 MobiDBLite consensus disorder prediction 548 570 - -
Pral1909g00001 739 PANTHER VIN3-LIKE PROTEIN 2-RELATED 10 739 IPR044514 GO:0010048|GO:0040029
Pral1909g00001 739 MobiDBLite consensus disorder prediction 602 640 - -
Pral1909g00001 739 CDD FN3 351 425 IPR003961 GO:0005515
Pral1909g00001 739 MobiDBLite consensus disorder prediction 443 486 - -
Pral1909g00001 739 MobiDBLite consensus disorder prediction 599 640 - -
Pral1909g00001 739 MobiDBLite consensus disorder prediction 443 485 - -
Pral1909g00001 739 SUPERFAMILY Fibronectin type III 351 426 IPR036116 GO:0005515
Pral1909g00001 739 CDD PHD_VIN3_plant 162 227 - -
Pral1909g00001 739 ProSiteProfiles Fibronectin type-III domain profile. 347 441 IPR003961 GO:0005515
Pral1909g00001 739 MobiDBLite consensus disorder prediction 89 124 - -
Pral1909g00001 739 Gene3D Immunoglobulins 347 443 IPR013783 -
Pral1909g00001 739 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1909g00001 Pral-Chr1909 15836 20938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1909g00001 4 476 PHD Gene Family AT4G30200 54.724 2.01e-165 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1909g00001 - - gmx:100794721 1163.67