Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1908g00006 ATGGCAGCGAAAGAGGCATCGGAGTCCCGGAACCAAGCGCGACTGGCAATTCTGGAACTGGCCAACATGATCAGTGTGCCCATGTCCCTCAATGCCATCGTCCGACTCAACGTTCCCGACGCTATCTGGCAGTCCGGCTCCAACACTCCCCTCTCCGCCTCTCAGATCCTTTCGCGCGTCCTTCCCACCGGCGGCGATGCCGAAAACCTCCAACGAATCCTTCGTATGCTCACCAGTTATGGCGTCTTCGCCGAGCACATCGGCTCTGGCGGCGAGAGAAAATACTCCCTAACCGACGTCGGCAAAACCCTCGCCACCGATGACGAAGGCCTATCCTACGCGGCCTACGTACTCCAGCACCACCAGGATGCGTTGATTCGAGCGTGGCCCTTGGTGCACGAGGCAGTGAAGGACTCAACGGAGGAGCCGTTCGTGAAGGCGAACGGAGAGGCGGCGTACGATTACTATGTGAAAGATCCGGAGATGAACGAATTGATGGTGAAGGCGATGTCGGGGGTATCGGTACCGTTCGTGAAGGCGGTGCTGGAGGGTTACGATGGTTTCGAAGGGGTGGAGAGATTGGTAGACGTGGGTGGGAGTGGAGGGGATTGTCTGAGGATGATCTTACAGAAACATCCGAGCGTGAGGGAAGGGATTAACTTCGATCTGCCTGAAGTGGTGGCGAAAGCACCGGCAATTTCTGGGGTCACTCACGTGGGAGGTGACATGTTCAAGTCTATTCCTCAAGGGGATGCCGTCTTCATGAAGTGGGTACTGACAACGTGGACGGACGAGGAGTGCAAGAGGATACTGGAGAACTGTTACAAGGCTCTGCCGGAGGGAGGAAAAGTGATAGCTTGTGAGCCAGTGCTGCCTGAGGAATCAGATGACAGCCACAGAACTCGAGCATTGCTGGAGGGTGACATTTTTGTGATGACAATCTACAGAGCCAAAGGTAAGCATCGCACCCAGGATCAGTTCAGGCACCTCGGCCTCTCTGCTGGTTTCTCTCGTTTCCGTGTCCTCCATTTTGACTACTTCTATGCCCTCCTTGAATTCCAAAAGTGA 1068 0.5534 MAAKEASESRNQARLAILELANMISVPMSLNAIVRLNVPDAIWQSGSNTPLSASQILSRVLPTGGDAENLQRILRMLTSYGVFAEHIGSGGERKYSLTDVGKTLATDDEGLSYAAYVLQHHQDALIRAWPLVHEAVKDSTEEPFVKANGEAAYDYYVKDPEMNELMVKAMSGVSVPFVKAVLEGYDGFEGVERLVDVGGSGGDCLRMILQKHPSVREGINFDLPEVVAKAPAISGVTHVGGDMFKSIPQGDAVFMKWVLTTWTDEECKRILENCYKALPEGGKVIACEPVLPEESDDSHRTRALLEGDIFVMTIYRAKGKHRTQDQFRHLGLSAGFSRFRVLHFDYFYALLEFQK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1908g00006 355 CDD AdoMet_MTases 193 287 - -
Pral1908g00006 355 FunFam Caffeic acid 3-O-methyltransferase 110 355 - -
Pral1908g00006 355 SUPERFAMILY "Winged helix" DNA-binding domain 8 107 IPR036390 -
Pral1908g00006 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 355 IPR016461 GO:0008168
Pral1908g00006 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 353 IPR029063 -
Pral1908g00006 355 Gene3D Vaccinia Virus protein VP39 110 355 IPR029063 -
Pral1908g00006 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Pral1908g00006 355 PANTHER O-METHYLTRANSFERASE 20 345 IPR016461 GO:0008168
Pral1908g00006 355 Gene3D - 1 109 IPR036388 -
Pral1908g00006 355 Pfam Dimerisation domain 28 78 IPR012967 GO:0046983
Pral1908g00006 355 Pfam O-methyltransferase domain 132 337 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1908g00006 Pral-Chr1908 37166 40020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1908g00006 4 355 Monolignol Biosynthesis Gene Families AT3G53140 75.070 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1908g00006 - - csav:115722698 591.267