Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1905g00005 ATGGATGTTGTTGCTTCTGTTACGGCTAATATATTGACCAAGTTAGTAGATGAAGCAATACTTCAAGCTTGCTATCCTTTCCGCTTCAACAAGTATGTCAAAGAGCTTGAAACAAAACAACAGAACCTGCAATCAAAAATACAAGAGGTTCTAACTCATGCTGAAAATGAGAGGAAGAATACTCATAAGGTTGTTCCTAAAGTTGAGAATTGGTTACACAAAGCAGACTCTCTGATGGCACAAGTGGTGGAGCTGCAAGAGAAAACCAAGAAAAGAAACAAGATGTCTTGCCTTAAGCATTGTCCAGACTTGATCAGTCGTTATAATCTGGCAAAGCAGCTTGAGGAGAAGACAAATGAAATTAGAAAGCACAATGAAGTTGAATTCTCGGAGTTTTCTCGACTTACTTCGCTTGTAGGTATGCATTACTTTTCTTCACAAGATTTTGTGGCCTTTGACAGTAGAAAGGGGGCTTGTGAGGATCTTTTAAGGGCTATTAAGGATGATAAGATTCATATGATAGGATTGTGTGGCATGGGCGGGTCTGGGAAAACAACTTTGGTAAAAGAAGTGGGCAAAGAAGCAGAGAAATTTTTTGATAAAGTAGTCTTTGTAGTTGTGTCTAATACCATTGATGTAAGAAAAATTCAGAGCGAGATTGCCAACCCACTAAAGTTGGAATTGAAAGAGGAAGAGACACAAGTGAGAGCTAGACGCTTGTCCATGAGATTGAGCAGTGGAGAAAGGTTTTTGATTATTCTGGATGACGTATGGGAGAAGCTTAATTTTGAGGACATAGGGATTCCTACTAATAACGATCAAATGGGCTGCACTACTCTTATAACCACCCGCAATTTGCATGTATGTAAATCGATGGGTTGCCAAAAAAAAATTCCCCTGGAGGGTTTAAAAGGGAATGATTCTTGGGCCCTTTTTAAGAAGCATGCTGAGTTGTCTGATGATTGCTTTGATAAATGGAAGGATATAGCAAAAAAAATTACAAAAAAATGTGATGGTTTACCTATTGCAATTGCAGCAGTAGCCAGTGCTTTGAAGGATAAACCTTATGATGAGTGGGTTGCAGCATTGAAAACATTGAGAAGTTCACGTTGGATAGATGTTGAAGAAGGTCTCAGAGATTGA 1143 0.3885 MDVVASVTANILTKLVDEAILQACYPFRFNKYVKELETKQQNLQSKIQEVLTHAENERKNTHKVVPKVENWLHKADSLMAQVVELQEKTKKRNKMSCLKHCPDLISRYNLAKQLEEKTNEIRKHNEVEFSEFSRLTSLVGMHYFSSQDFVAFDSRKGACEDLLRAIKDDKIHMIGLCGMGGSGKTTLVKEVGKEAEKFFDKVVFVVVSNTIDVRKIQSEIANPLKLELKEEETQVRARRLSMRLSSGERFLIILDDVWEKLNFEDIGIPTNNDQMGCTTLITTRNLHVCKSMGCQKKIPLEGLKGNDSWALFKKHAELSDDCFDKWKDIAKKITKKCDGLPIAIAAVASALKDKPYDEWVAALKTLRSSRWIDVEEGLRD 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1905g00005 380 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 34 369 - -
Pral1905g00005 380 FunFam Probable disease resistance protein At1g61300 135 297 - -
Pral1905g00005 380 Coils Coil 33 53 - -
Pral1905g00005 380 Pfam NB-ARC domain 167 371 IPR002182 GO:0043531
Pral1905g00005 380 Coils Coil 68 88 - -
Pral1905g00005 380 Gene3D - 143 298 IPR027417 -
Pral1905g00005 380 PRINTS Disease resistance protein signature 173 188 - -
Pral1905g00005 380 PRINTS Disease resistance protein signature 244 258 - -
Pral1905g00005 380 PRINTS Disease resistance protein signature 337 351 - -
Pral1905g00005 380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 373 IPR027417 -
Pral1905g00005 380 Gene3D - 302 379 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1905g00005 Pral-Chr1905 23408 24654 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1905g00005 171 364 WRKY Transcription Factor Family AT5G45050 28.293 5.24e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1905g00005 - - lang:109340689 324.709