Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1905g00001 ATGTGGGACGTAAAAAGGAAAGAAAGTAAATCCAAGAAGGTGACATCTAGGAAGCCCAAGGAAACATCTAGGAAGCCCAAGGAAACTACTTCTCGTTCTAAGACAGCAGTAACTTTTGAGCGAGAAAAGCATCTTGGTACCTCAGAAGGTCTTTCTAGCACCTTTGATCAACCAAAATGTCATCTTTGTTGTGGAGATGCGTGCACTTTGAATTATATTGCTTGTGAAATCTGTGGAGAGTGGTTTCATGGGGATGCTTTTGGACTCACTCTGGAGAATGTCAGACAACTCATTGGATTTCGGTGTCATGTTTGTCGTGATAGGACTGCACCAATGTGTCCCCACAAGAATAATAATGCCATGACTCATGCTGAAATCAAAGCAGCAACCGAGTATGCAGAGGAACTACATAATTCTGTTTCACTTCAGCCATTGAGTCAGGTTTAG 447 0.4228 MWDVKRKESKSKKVTSRKPKETSRKPKETTSRSKTAVTFEREKHLGTSEGLSSTFDQPKCHLCCGDACTLNYIACEICGEWFHGDAFGLTLENVRQLIGFRCHVCRDRTAPMCPHKNNNAMTHAEIKAATEYAEELHNSVSLQPLSQV 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1905g00001 148 MobiDBLite consensus disorder prediction 1 53 - -
Pral1905g00001 148 PANTHER PHD FINGER FAMILY PROTEIN 10 114 - -
Pral1905g00001 148 MobiDBLite consensus disorder prediction 1 47 - -
Pral1905g00001 148 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 52 113 IPR013083 -
Pral1905g00001 148 SUPERFAMILY FYVE/PHD zinc finger 33 109 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1905g00001 Pral-Chr1905 944 2755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1905g00001 39 115 PHD Transcription Factor Family AT5G12400 49.367 1.16e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1905g00001 - - lja:Lj3g3v3579340.2 173.326