Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1900g00005 ATGGGTAACGTAGATTACGTGTACCCATCGGCGGCGATGAACATGGAGGAGTGTGGTCCGCGCGTGGCGATTCCACCGCCTCAGCCGTTCGTCAAGTCATTCATGTACTCTCTTAAGGAGACTTTCTTTCCGGATGACCCTTTCAGGCAATTCAAAAACCAGCCACCTTCTAGAAAGCTTCTTCTTGGCCTGCAGTACTTCTTCCCCGTCCTGGAATGGGCGCCTCGCTACACTCTCAGCTTCTTGAAATCAGACATCATCGCCGGCATCACCATCGCTAGCTTGGCTATTCCTCAAGGCATCAGTTACGCCAAACTCGCCAACCTCCCTCCAATTCTTGGACTCTATTCAAGCTTCATACCGCCGCTGATTTATGCGATGATGGGAAGCTCCAGGGATTTGGCTGTGGGAACAGTGGCGGTTGGATCGCTTTTACTGGGCTCTATGCTCTCTAGATCGGTTAATCCCAACGTCGACTCAGCCCTCTTTCTTCACCTTGCCTTCACTGCTACATTCTTCGCCGGGATTTTGCAGGCTTCATTGGGTTTGTTTAGGTTAGGGTTTATCGTGGATTTTCTGTCACATGCATCAATAGTAGGGTTCATGGGAGGAGCAGCAACAGTGGTATGCCTGCAACAGTTAAAATCGCTTCTGGGACTCGAACATTTCACCCATGACGCCGATCTTGTCTCTGTGATGCGATCTGTTTTTAGCCAAACACATGAGTGGAGATGGGAAAGCGCTGTGCTAGGGTGCTGCTTCATCTTCTTCTTGCTCCTCACGCGATACTTCAGCAAACGACGACCGAAATTCTTTTGGGTGTCAGCAATGGCGCCGTTGACGTCCGTTATCCTTGGAAGTCTGCTTGTTTATTTCACTCATGCGGAGAAGCACGGCGTCCAAGTGATAGGAGAGTTGAAGAAGGGATTAAATCCCCCATCCTTCAATGATTTGGTATTTGTGTCGCCTTATCTGAGCACAGCTGTTAAAACTGGGCTTGTCACCGGCATCATAGCCCTCGCCGAAGGAATAGCAGTTGGAAGAAGCTTTGCAATGTTCAAGAACTACCACATTGATGGCAACAAAGAGATGATAGCTTTTGGGACCATGAACATAGTTGGTTCCCTCACCTCCTGTTACCTCACTACAGGGCCATTTTCCCGGTCGGCTGTAAACTACAATGCGGGATGCAAGACAGCAGTATCAAACATTGTGATGGCAATTGCTGTGATGATGACATTGTTATTCCTGACACCTTTATTCTATTACACTCCATTGGTGGTGCTCTCGGCCATCATTGTATCAGCAATGCTGGGCCTTATAGATTATCAGGCAGCCATACATCTCTTGAAGATTGACAAGTTCGACTTCCTTGTATGTATCAGTGCTTATGTTGGTGTTGTCTTTGGCAGTGTCGAAATTGGCCTTGTCATAGCCGTATTCATATCTGTGCTTAGGGTTCTGCTGTTTGTTGCAAGGCCAAGGACGTTTGTTTTGGGCAACATTCCAAATTCTGTGGTGTACAGAAATGTTGAGCAGTACCAAAATGCCACTCATGTTCCTGGGATACTAATTCTAGAGATTGATTCGCCAATTTACTTTGCCAATGCCAGTTATTTGAGAGAGAGGATTGCGAGGTGGATTGATGAAGAGGAAGACAGGATTAAAGCTACAGGGGAAACCAACTTGCAGAGTGTAATTCTAGATATGACTACCATTGGGAACATTGATACAAGTGGAGTAAGCATGCTTGAAGAGGTGAAGAAGATCACCGATAGGAGAGGGCTGCAGCTTGTTTTGGTCAATCCTGGAAGTGAGGTGATGAAGAAGCTCAACAGAGCCAAGTTCATCGAGACTATAGGTCAGAAATGGGTATTTCTGACAGTTGAAGAAGCTGTCAGAGCATGCAACTACATGCTTCACACATGCAAACCTCATTCTGGGAAAGATGAAACAGAAGCTTGGAACAATGTCTAA 1977 0.4679 MGNVDYVYPSAAMNMEECGPRVAIPPPQPFVKSFMYSLKETFFPDDPFRQFKNQPPSRKLLLGLQYFFPVLEWAPRYTLSFLKSDIIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLLGSMLSRSVNPNVDSALFLHLAFTATFFAGILQASLGLFRLGFIVDFLSHASIVGFMGGAATVVCLQQLKSLLGLEHFTHDADLVSVMRSVFSQTHEWRWESAVLGCCFIFFLLLTRYFSKRRPKFFWVSAMAPLTSVILGSLLVYFTHAEKHGVQVIGELKKGLNPPSFNDLVFVSPYLSTAVKTGLVTGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAFGTMNIVGSLTSCYLTTGPFSRSAVNYNAGCKTAVSNIVMAIAVMMTLLFLTPLFYYTPLVVLSAIIVSAMLGLIDYQAAIHLLKIDKFDFLVCISAYVGVVFGSVEIGLVIAVFISVLRVLLFVARPRTFVLGNIPNSVVYRNVEQYQNATHVPGILILEIDSPIYFANASYLRERIARWIDEEEDRIKATGETNLQSVILDMTTIGNIDTSGVSMLEEVKKITDRRGLQLVLVNPGSEVMKKLNRAKFIETIGQKWVFLTVEEAVRACNYMLHTCKPHSGKDETEAWNNV 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1900g00005 658 Pfam STAS domain 514 632 IPR002645 -
Pral1900g00005 658 Pfam Sulfate permease family 82 462 IPR011547 GO:0016020
Pral1900g00005 658 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271|GO:0008272
Pral1900g00005 658 PANTHER SULFATE TRANSPORTER 32 636 IPR001902 GO:0016020|GO:0055085
Pral1900g00005 658 SUPERFAMILY SpoIIaa-like 517 637 IPR036513 -
Pral1900g00005 658 Gene3D STAS domain 493 639 IPR036513 -
Pral1900g00005 658 FunFam Sulfate transporter 31 493 639 - -
Pral1900g00005 658 NCBIfam sulfate permease 69 632 IPR001902 GO:0016020|GO:0055085
Pral1900g00005 658 CDD STAS_SulP_like_sulfate_transporter 514 629 - -
Pral1900g00005 658 ProSiteProfiles STAS domain profile. 513 636 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1900g00005 Pral-Chr1900 33755 40439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1900g00005 21 658 Inorganic Solute Cotransporters AT4G02700 67.606 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1900g00005 K17471 - gmx:100791091 1109.75