Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1895g00002 ATGGCCACTCTAGAATCTGGACTCACAGTCTTGGGATCTTTCCGCTTTGCGTCGTCCCTCGAGTTTATCTCCATCGACTCCAGCAGGAGGCTCTGCTTCGAATTATGCTCTGCGCTGCAAGAGGCGGTAACAGAAGAAAACCCAGGGCAAACCCAGGAAAACAACATAAAAAAGAAGCTCTACGTGTTTAATCTACCATGGTCGCTATCGGTGGTGGACATCAAGAACCTCTTTGGTCAATGCGGAACTGTAACCGATGTCGAGATAATAAAAAACAAAGATGGCAAGAGCAGAGGATTTGCCTTCGTCACTATGGCTTCCGGGGAAGAGGCGCAGACTGCAATTGATAAATTTGACTCTCATGAATTGTCTGGCAGGATAATAAGGGTAGAGCTTGCAAAGAGATTCAAGAAACCTCCTCCTCCACGCCCTCCTAAAAGTCCCCCTGCCGGCGAAACAAGCCATAAAATTTATGCGTCGAATCTTGCCTGGAAAGCAAGATCTAGCCATCTCAGAGCATTCTTTGCAGAGAATTTCAAGTCACCGGTTTCAGCCAGGGTTGTCTTTGACAGCCCTAATGGAAGATCTGCTGGGTATGGATTTGTTTCTTTTTCTACAAGAGATGAAGCAGAGGCTGCCATTTCTACTCTAGATGGGAAGGAATTAATGGGGCGACCACTTCGCCTAAAATTCAGTGAAAGGACTGTCAAAGAATCTGGGGATGAGAAAGGGGAGGACCAAGGTTCTGATGATCAAGCGGCAGAACCAGAGAAAGTAGAAGAGCAAGGTTCTGATGGTGAACTGGCAGAATCATAG 816 0.4681 MATLESGLTVLGSFRFASSLEFISIDSSRRLCFELCSALQEAVTEENPGQTQENNIKKKLYVFNLPWSLSVVDIKNLFGQCGTVTDVEIIKNKDGKSRGFAFVTMASGEEAQTAIDKFDSHELSGRIIRVELAKRFKKPPPPRPPKSPPAGETSHKIYASNLAWKARSSHLRAFFAENFKSPVSARVVFDSPNGRSAGYGFVSFSTRDEAEAAISTLDGKELMGRPLRLKFSERTVKESGDEKGEDQGSDDQAAEPEKVEEQGSDGELAES 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1895g00002 271 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 58 135 IPR000504 GO:0003723
Pral1895g00002 271 Gene3D - 37 145 IPR012677 -
Pral1895g00002 271 Gene3D - 146 267 IPR012677 -
Pral1895g00002 271 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 60 128 IPR000504 GO:0003723
Pral1895g00002 271 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 157 228 IPR000504 GO:0003723
Pral1895g00002 271 SUPERFAMILY RNA-binding domain, RBD 138 236 IPR035979 GO:0003676
Pral1895g00002 271 MobiDBLite consensus disorder prediction 228 265 - -
Pral1895g00002 271 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 155 234 IPR000504 GO:0003723
Pral1895g00002 271 SMART rrm1_1 59 131 IPR000504 GO:0003723
Pral1895g00002 271 SMART rrm1_1 156 230 IPR000504 GO:0003723
Pral1895g00002 271 CDD RRM_SF 60 131 - -
Pral1895g00002 271 PANTHER OS02G0815200 PROTEIN 41 233 - -
Pral1895g00002 271 SUPERFAMILY RNA-binding domain, RBD 47 142 IPR035979 GO:0003676
Pral1895g00002 271 MobiDBLite consensus disorder prediction 228 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1895g00002 Pral-Chr1895 2853 5467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1895g00002 60 242 Eukaryotic Initiation Factors Gene Family AT4G34110 26.633 4.41e-13 67.0