Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1893g00001 ATGGAGGTTCAGGTTCCTATTTCTTTCTTCTTCACCTTTTTTTGCTTTTTCATAGTTGTATTAAGCATAGTTAAAAGACCTCATTCCAGAAAGTCCCTCAGAACCCTACCACCAGGACCATGGAAGATACCTCTCATAGGGAATTTACATCAGTTTGTAGGATCACTACCCCATCATTCTCTAAGAAAATTGGCAAACAAATATGGACCCTTAATGCATCTTCAGCTTGGAGGAACTTCAAACATAGTAATCTCATCCCCAGAAATGGCCAAAGAGATCATGAAGACCCATGATGCCATTTTCTCTAACAGACCATATTTTCTTGCTTCAAGAATTATTTCATACAATTCAACCAACATTGGTTTTTCTCCTTATGGAAGTTACTGGAGGCATCTGAGGAAAATCTGCACTGTGGAGCTATTATCAGCAAAGAGAGTTCAATCATTCAGTCATATAAGAGAAGAAGAAGTTTCTGCCCTTGTTAGGAAAATTTCTGCAAATGAAGGATCTGTGATTAATCTCAGTGAGTACCTTTTCTCACTCACGACTGGAATAACTTCAAGAGCAGCTTTTGGTAAGAAATGTGGAGACCATGAAGCTTTCTTATCAACAATGGAAGAAGCTTTAAAGCTGGCTGGAGGTTTCTCTGTTTCTGATCTGTTTCCTTCTGTCAAAGTTCTTCCATTGATCAGTGGGATGAGAGGCAAGCTTGAGAGGCTTCACAGGGAGCTTGATAGAATACTTGAGAACATAGTCAAGGATCATAAAGAGGAAAAGAGAATCCATGGCCAAGCTGAGGAAGATCTAGTTGATGTTCTACTAAAGCTTCAACAGCAGAATGATCCTCATACCCCTCAGCTTACCGACAACAATATCAAAGCTGTTATTCTGGACATTTTTGGAGCTGGAACTGACACATCATCAACAACCCTAGAGTGGGCAATGTCAGAAATGCTGAAAAACCCAAAGGTTATGGAAGAAGCACAGGCAGAGGTAAGAAAGGTATTCAGAGAACAAGGTTATGCCTCTGAAGCAGACCTTCAGCATTTGAAATATTTAAAGCTGGTCGTTAAAGAAACTCTTAGACTACATCCACCAGCAGTACTGCTACTTCCAAGAGAAAACACGGAGAAATGCAAAATCAATGGATATGAGATACCTGCTAAGACGAGAGTGATTGTGAATGCTTGGGCTATAGGAAGAGACTCCATGATTTGGAATGAAGCTGAGAGATTCAGACCAGAGAGGTTTGTTGATAGTCCAATTGATTTCAGAGGAAGAGACTTTGAATACATACCATTTGGGGGCGGCAGGAGGATATGCCCAGGAATCACTTTTGCCACAGCTCTTATTGAGCAGGCACTGGCTCAATTGCTTTATCATTTTAATTGGAAGCTTCCCAATGAAATGCAGATTGAAGAATTTGACATGACTGAGTCCTTTGGTTCCACAGTAAGAAGAAAAGACAAGCTCTTAGTAATTCCTATTGGTTGTTGCAACTAA 1503 0.4025 MEVQVPISFFFTFFCFFIVVLSIVKRPHSRKSLRTLPPGPWKIPLIGNLHQFVGSLPHHSLRKLANKYGPLMHLQLGGTSNIVISSPEMAKEIMKTHDAIFSNRPYFLASRIISYNSTNIGFSPYGSYWRHLRKICTVELLSAKRVQSFSHIREEEVSALVRKISANEGSVINLSEYLFSLTTGITSRAAFGKKCGDHEAFLSTMEEALKLAGGFSVSDLFPSVKVLPLISGMRGKLERLHRELDRILENIVKDHKEEKRIHGQAEEDLVDVLLKLQQQNDPHTPQLTDNNIKAVILDIFGAGTDTSSTTLEWAMSEMLKNPKVMEEAQAEVRKVFREQGYASEADLQHLKYLKLVVKETLRLHPPAVLLLPRENTEKCKINGYEIPAKTRVIVNAWAIGRDSMIWNEAERFRPERFVDSPIDFRGRDFEYIPFGGGRRICPGITFATALIEQALAQLLYHFNWKLPNEMQIEEFDMTESFGSTVRRKDKLLVIPIGCCN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1893g00001 500 Pfam Cytochrome P450 37 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1893g00001 500 SUPERFAMILY Cytochrome P450 37 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1893g00001 500 Gene3D Cytochrome P450 29 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1893g00001 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1893g00001 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1893g00001 500 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1893g00001 500 CDD CYP71-like 67 491 - -
Pral1893g00001 500 PANTHER CYTOCHROME P450 71B11-RELATED 19 496 - -
Pral1893g00001 500 Coils Coil 230 257 - -
Pral1893g00001 500 FunFam Cytochrome P450 71D8 29 495 - -
Pral1893g00001 500 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1893g00001 500 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1893g00001 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1893g00001 500 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1893g00001 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1893g00001 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1893g00001 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1893g00001 500 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1893g00001 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1893g00001 Pral-Chr1893 6664 8493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1893g00001 14 495 Cytochrome P450 AT3G26300 43.927 1.41e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1893g00001 - - qsa:O6P43_021270 655.595