Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1891g00007 ATGACGTCGAGCATCGTCAAGGACATCCTGGCGAGCCCGATACAGATGGCGGACCAGGTGATCAAGCTGGCCGACGAAGCCCAAACATTCAAACTAGAATGTTTAGAGCTCAAGGCCAAAACGGAGAAACTCATTGCCTTGCTCCGGCAAGCCGCGAGGGCCAGCAATGACCTCTACGAACGGCCAACACGGCGCATCATCGACGACACAGAACAAGTCCTCGAGAAGGCCCTGCAACTGGTCGACAAATGCCGCGGTAACGGCCTCATGAAACGACTCTTCACCATCATACCCGCGACGGCGTTTCGCAAGACGTCGATGCAGCTCGAGAATTCCCTCGGAGACATACAATGGCTCCTTCGCGTGTCTATTTCCGCCGACGAGCGCGACGACGAGTATCTGGGTCTGCCCCCAATCGCCGCCAACGAGCCCATCTTGTGTCTAATCTGGGAGCAGATAGCAATATTGCTCACGGGGTGTTCCATGGAAGATCGCTCGGACGCTGCGGCTTCCTTGGTCTCTTTGGCTCGAGACAACGACAGGTACAACAAGTTGATTATTGAGGAGGGTGGTGTTCCGCCACTTTTGAAATTGTTGAAAGAAGGGCATGTAGAGGGTCAGGAAAACGCAGCGAGGGCGATTGGGTTGCTTGGGAAAGACCCAGAAAGCGTGGAACAGATTGTGAATGCTGGGGTTTGCACAGTGTTTGCGAAAATCCTCAAAGAAGGTGACATGAAGGTTCAGGCGATGGTGGCTTGGGCTATCTCGGAATTAGCATATCATCACCCAAAGTGTCAGGATCACTTTGCTCAGAACAATTGCATACGCTTGCTGGTCAGGCATCTCGCCTTTGAGACCATCCAGGAACACAGCAAGTATAGCATTGCCAGTAAACAAAGCATGTCGTCGATTCATTCGGTCGTGTTGGCCAGTAACGCTCAGAACCAGAACGATCATCATGACAAGAAAACTATGCTTGAAGACAACGATAATAAGCATCATCAGATTGCTCGCCCTGTGGGGAACCAATCATCCAACCAAATGCACAATCTAGTTACCAACACAATGGCCATGAAACACCAACCAAATGGGCACGCACATGTTTCAATTGCAGGAACAAGTATGAAGGGAAGGGAGGCTGTGGATCCAGTTATAAAGGCCCAAATGAAGGCCATGGCAGCTAAAGCGCTGTGGCAACTAGCAAAGGGGAATATTACTGTCTGTCGCAGCATCACTGAATCGAGGGCTCTTTTGTGTTTTGCTGTTCTGCTGGAGAAGGGACCTGATGACGTTAAATCCTTTTCGGCTTTTGCTTTAATGGAGATCACGGCTGTGGCAGAGCAGCACGCAGAGTTGAGACGTTCAGCTTTCAAACCCAATTCCCCTGCTGCAAAAGCCATGGTGGATCAGCTTCTTAGGATCATTCAAAAAGGGGAATCCGATCTTCTGATACCTTGCATCAGATCGATAGGTCACTTGGCGAGGACTTTCAGAGCAACAGAAACGAGAATCATAGCACCATTGGTGAGGCTGCTTGATGAAGTAGAATTCGAACTCGAGGTTCGACTGGAATCCGCAATTGCACTTACCAAGTTTGCTTGTACTGAGAACTTTCTGCACGAGACTCACTGCTCGGCCATAATAGAAGCAGGAGGAGCAAAGCTCGTGATTCAAATGATTTTATTTGGGGACCAAGTGATCCATAAGATTTGTGCGTTGAAACTTCTGGCTTATGTGGCAATGCACGTGCCCAAAAGTGAGACGCTTGCCAAAGACGAAGTTCTTGGAGTTTTGGAGTGGGGTAGGAAGAACTCGCAACTGAATCAAGATCCGCTCATTGACGACCTTTTAGAGCAAGCCACGGGTAGATTGGAACTGTATCAAGCAAGAGGTACACGAGGATTCCACTGA 1911 0.4966 MTSSIVKDILASPIQMADQVIKLADEAQTFKLECLELKAKTEKLIALLRQAARASNDLYERPTRRIIDDTEQVLEKALQLVDKCRGNGLMKRLFTIIPATAFRKTSMQLENSLGDIQWLLRVSISADERDDEYLGLPPIAANEPILCLIWEQIAILLTGCSMEDRSDAAASLVSLARDNDRYNKLIIEEGGVPPLLKLLKEGHVEGQENAARAIGLLGKDPESVEQIVNAGVCTVFAKILKEGDMKVQAMVAWAISELAYHHPKCQDHFAQNNCIRLLVRHLAFETIQEHSKYSIASKQSMSSIHSVVLASNAQNQNDHHDKKTMLEDNDNKHHQIARPVGNQSSNQMHNLVTNTMAMKHQPNGHAHVSIAGTSMKGREAVDPVIKAQMKAMAAKALWQLAKGNITVCRSITESRALLCFAVLLEKGPDDVKSFSAFALMEITAVAEQHAELRRSAFKPNSPAAKAMVDQLLRIIQKGESDLLIPCIRSIGHLARTFRATETRIIAPLVRLLDEVEFELEVRLESAIALTKFACTENFLHETHCSAIIEAGGAKLVIQMILFGDQVIHKICALKLLAYVAMHVPKSETLAKDEVLGVLEWGRKNSQLNQDPLIDDLLEQATGRLELYQARGTRGFH 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1891g00007 636 PANTHER ARMADILLO REPEAT ONLY 4 4 631 - -
Pral1891g00007 636 Pfam Armadillo/beta-catenin-like repeat 220 259 IPR000225 GO:0005515
Pral1891g00007 636 Pfam Armadillo/beta-catenin-like repeat 185 215 IPR000225 GO:0005515
Pral1891g00007 636 Gene3D - 365 607 IPR011989 -
Pral1891g00007 636 SMART arm_5 220 260 IPR000225 GO:0005515
Pral1891g00007 636 SMART arm_5 178 219 IPR000225 GO:0005515
Pral1891g00007 636 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 190 232 IPR000225 GO:0005515
Pral1891g00007 636 FunFam Armadillo repeat only 2 151 323 - -
Pral1891g00007 636 Gene3D - 4 122 IPR036537 GO:0007166
Pral1891g00007 636 Coils Coil 37 57 - -
Pral1891g00007 636 Gene3D - 153 337 IPR011989 -
Pral1891g00007 636 FunFam Armadillo repeat only 4 3 122 - -
Pral1891g00007 636 SUPERFAMILY ARM repeat 157 598 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1891g00007 Pral-Chr1891 20752 23474 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1891g00007 153 279 U-box Gene Family AT2G28830 33.077 2.36e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1891g00007 - - qsa:O6P43_002104 890.567