Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1890g00002 ATGCTGGTTCGGAGGAGAATGATGAGTTGGAGGAGGGTGGCCAAGTCTCTGCAAGCCTTTGCAGCTCATGGTTTACTCTTCTCCTTCACACTGCTGCTCGTTCTGAAGCTTGACCATGTCGTTCATTACTCATGGTGGACCATATTTTCACCTCTGTGGCTTTTTCATTCCATTGTGGCAAGAGGAAGGTTTTCCTTGCCTGCTCCTTCAATGCCTCATGATCGTCATTGGGCTCCATGTCACGCCGTTGTAGCAACACCCTTACTTGTTGCTTTTGAGCTGCTTCTTTGTATACATCTTGAGATCAGTCATGTGGTAAATTTAAAGGTCGTCTTCTTACCCCTATTGGCTTTTGAAGTGGCAATTTTGATTGATAACATCAGGATGTGCAGGGCTTTAATGCCTGGAGATGATGAAAATATGAGTGATGAGGCAATATGGGAAACCCTTCCTCACTTCTGGGTTGCGATATCCATGGTCTTCTTTATTGCTGCTACAGTGTTCACTCTTCTTAAGATATGTGGTGATGTTGCTGCTCTGGGCTGGTGGGACTTATTTATTAACTTTGGCATTGCAGAGTGCTTTGCCTTTCTTGTTTGTACAAAGTGGTACAATCCAACAATTCATGGAAAATGTCACATTGACACAGCAGATCCTAGCTCATCATCACTTTCATCATCATTTACTATAAGATACCTGGACTGGGATAGAGGTTTGGTGGTTCCTACGGATGAAGAGAGGCAGCAAAGTAGCCTATGCAGTCTACAGGACATTGGTGGGCATATCATGAAGATTCCATTCATAGCTTTTCAAATTCTGCTATTTATGCATTTGGAGGGAACGCCACCTGCTGCCAGAACCATGTCGAGTGCTGTTGTCTTTTCTCCCCTTTTTCTGTTGCAAGGAGCTGGGGTTTTATTTGCGGCTTATAGATTAGTGGAGAAATTAGTTCTCTTAGTTTACAGTGGAGATGTTCCTGGAAGATACTCTGATGTAGCACTAAAAGCCCGTGATTGTTTTGGATTCTTGCACCATGGCTCAAGGCTGCTGGGTTGGTGGTCAATAGATGAAGGAAGCCGAGAGGAACAAGCCAGGCTTTATTGCGATGGGGGTTCAGGGTATAATACTTTCTCCCCTGATATGGTGAAGAAAATGCCTAAAGCGGATCTTGTTGAGGAGATCTGGAAACTACAAGCTGCCCTAGGTGAGCAGTCAGAGATTACAAAATTTAGCCAGCAGGAGTATGAAAGACTCCAAAACGGACTAGGGAGTAGAGACCTGATATGCTATCATCTTTGTTCCTCAATTTTTTTGTGCCAAAACTCTGGTCCTCGGGATAATGTTAAAAATATAATTTAA 1359 0.4364 MLVRRRMMSWRRVAKSLQAFAAHGLLFSFTLLLVLKLDHVVHYSWWTIFSPLWLFHSIVARGRFSLPAPSMPHDRHWAPCHAVVATPLLVAFELLLCIHLEISHVVNLKVVFLPLLAFEVAILIDNIRMCRALMPGDDENMSDEAIWETLPHFWVAISMVFFIAATVFTLLKICGDVAALGWWDLFINFGIAECFAFLVCTKWYNPTIHGKCHIDTADPSSSSLSSSFTIRYLDWDRGLVVPTDEERQQSSLCSLQDIGGHIMKIPFIAFQILLFMHLEGTPPAARTMSSAVVFSPLFLLQGAGVLFAAYRLVEKLVLLVYSGDVPGRYSDVALKARDCFGFLHHGSRLLGWWSIDEGSREEQARLYCDGGSGYNTFSPDMVKKMPKADLVEEIWKLQAALGEQSEITKFSQQEYERLQNGLGSRDLICYHLCSSIFLCQNSGPRDNVKNII 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1890g00002 452 Pfam Transmembrane Fragile-X-F protein 35 300 IPR019396 -
Pral1890g00002 452 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 8 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1890g00002 Pral-Chr1890 22255 34124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1890g00002 8 420 C3H Transcription Factor Family AT1G73950 65.321 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1890g00002 - - qsa:O6P43_032794 698.353