Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1886g00003 ATGGCTGGGTTGGAGGAATTGAGGAAAAAACTCGCACCTTTATTTGATGCGGAGAAGGGCTTTTCGACAGGTTCTACTTTGGACCCTTGTGATTCGTACACATTATCAGATGGTGGAACTGTTAACTTATTGAGCAAATCATATGGGGTGTACAATATCAACGAGCTTGGACTGCAAAAATGCACATCTCGATCTATAGATGAAACTGATCACAGTGAAAAAACATATAGATGTGCTTCCCATGAGATGAGAATATTTGGAGCAATTGGTAGTGGTGCCAGCAGTATTGTGCAGAGAGCTATACATATACCAACACATAGAATTATAGCGTTGAAGAAAATCAATATCTTTGAGAAGGAGAAAAGGCAGCAACTTCTTACTGAAATAAGGACATTATGTGAAGCACCTTGTTACCAAGGTCTTGTTGAATTCCATGGGGCATTCTACACTCCAGACTCTGGACAGATAAGCATAGCTTTGGAGTACATGGATGGAGGATCCCTAGCAGATATCCTAGCAGTGCATGGAAAAATACCTGAATCTATTCTTTCAGCCATGTTTCAGAAGCTCCTGCATGGGTTAAGCTATCTGCATGGAGTCAGACATTTAGTACACAGAGACATAAAACCAGCCAATTTACTTGTAAATCTCAAGGGGGAACCAAAAATTACTGATTTTGGTATCAGTGCTGGCTTAGAGAATTCAGTGGCAATGTGTGCTACTTTTGTTGGAACTGTTACATACATGTCACCTGAGCGAATTCGAAATGATAGCTATTCTTTTCCTGCTGATATATGGAGCCTTGGTCTTGCCCTGCTTGAGTGTGGAACTGGAGAATTCCCATATACAGCTAATGAAGGTCCTGTAAATCTTATGTTGCAGATTCTAGAAGATCCATCACCATCACCGTCAAATCACAAGTTTTCACCTGAATTCAACTCATTTGTTGGTGCTTGCTTGCAGAAGGACCCAGATGCCAGGCCAACAGCAGATGAGTTGCTTCGGCACCCCTTTATCACAAAGTATGAGAATGCCAACGTAGATTTAGCAGGATTTGTACGAAGTGTCTTTGATCCAACACAACGAATGAAGGACTTGGCTGATATGTTCACGATTCATTATTACTTACTGTTCGATGGACCCGATGATCTCTGGCTTCATACTAGGAGCTTATACAATGAAGGTTCAATTTTCAGTTTCTCTGGGAAGCAATACGTTGGTCCAAACAATATTTTTGCAAAACTGTCGAGTATCCGAAGTACATTAGTTGGTGACTGGCCTCCTGACAAGCTGGTGCATGTCGTTGAAAAGCTTCAATGCCGTGCCCACGGTGAGGATGGAGTTGCAATTAGGGTATCAGGATCCTTTATTATTGGTAATCAATTCCTGATATGTGGAGATGGCATTCAAGTAGAGGGGTTGCCAAGCTTTAAGGATCTTGGAATTGATGTTTCTAGCAGGCGAATGGGTACATTTCATGAACAGTTTATCATAACACCCACCAATCTCATTGGATGCTACTCCATAGCTAACCAAGAGTTGTACATAAACCAATAG 1557 0.4149 MAGLEELRKKLAPLFDAEKGFSTGSTLDPCDSYTLSDGGTVNLLSKSYGVYNINELGLQKCTSRSIDETDHSEKTYRCASHEMRIFGAIGSGASSIVQRAIHIPTHRIIALKKINIFEKEKRQQLLTEIRTLCEAPCYQGLVEFHGAFYTPDSGQISIALEYMDGGSLADILAVHGKIPESILSAMFQKLLHGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERIRNDSYSFPADIWSLGLALLECGTGEFPYTANEGPVNLMLQILEDPSPSPSNHKFSPEFNSFVGACLQKDPDARPTADELLRHPFITKYENANVDLAGFVRSVFDPTQRMKDLADMFTIHYYLLFDGPDDLWLHTRSLYNEGSIFSFSGKQYVGPNNIFAKLSSIRSTLVGDWPPDKLVHVVEKLQCRAHGEDGVAIRVSGSFIIGNQFLICGDGIQVEGLPSFKDLGIDVSSRRMGTFHEQFIITPTNLIGCYSIANQELYINQ 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1886g00003 518 Gene3D - 365 517 - -
Pral1886g00003 518 Pfam Protein kinase domain 87 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1886g00003 518 ProSiteProfiles Nuclear transport factor 2 domain profile. 366 516 IPR018222 -
Pral1886g00003 518 FunFam mitogen-activated protein kinase kinase 3 165 361 - -
Pral1886g00003 518 Gene3D Phosphorylase Kinase; domain 1 53 164 - -
Pral1886g00003 518 FunFam Mitogen-activated protein kinase kinase 3 363 517 - -
Pral1886g00003 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Pral1886g00003 518 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Pral1886g00003 518 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 29 389 - -
Pral1886g00003 518 SUPERFAMILY NTF2-like 364 516 IPR032710 -
Pral1886g00003 518 SMART serkin_6 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1886g00003 518 SUPERFAMILY Protein kinase-like (PK-like) 85 361 IPR011009 -
Pral1886g00003 518 Gene3D Transferase(Phosphotransferase) domain 1 165 364 - -
Pral1886g00003 518 CDD PKc_MAPKK_plant_like 84 344 - -
Pral1886g00003 518 ProSiteProfiles Protein kinase domain profile. 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1886g00003 518 FunFam mitogen-activated protein kinase kinase 3 56 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1886g00003 Pral-Chr1886 31162 36518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1886g00003 30 517 MAP Kinase Kinase Gene Family AT5G40440 77.869 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pral1886g00003 Pkinase 1.8e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1886g00003 K20607 - gmx:100784935 952.584