Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1884g00002 ATGGCTAGCGACGAGAAGCAGAAAGATGCCGAGTTTTTCTTCGATCAGAACGAAGAGGATGCCAACGATGACGATGAATCTACCAAGCTTGTCATTGAGAGTAGTAGTGACAGCGGAAGCGACGACGACGGCAATGGTGGGCCTGACACTTTCTCATCGCAGCAATGGCCCCAGAGTTACAAAGAGACTGTCGATTCATACACAATTGCTGCATCGCCGAATATTGGAGCAGCTGTTCTCCGAACACCGAGTTTGATATATTCAAGTTTTGTCAATCGTTCCAAGAGTAGTTTAAGCCTAGATGGAAAGACTCCTTTATTATCTGATCATGAAGACTTGATTCAAAAGAAATCGTCATGGTTGGAGGGAGTTTCATTGCAAAAGCAACTTACTGGAGAATTACCCATTGGCCAAGGATGTAGCCTCACTCAAACAGTTTTCAATGGGGTTAACGTGATGGCTGGAGTTGGCCTTCTGTCCACGTCCTATACAGTGAAACAAGCTGGATGGGCAAGTTTGCTGGTGCTGGTTCTTTTTGCAGTTGTATGTTGTTACACAGCCACACTTATGAGATACTGCTTTGAAAGCAGAGAAGGCATCCTAACATATCCAGATATTGGAGAAGCAGCCTTCGGAAGAGCAGGCCGTCTTGCCATATCTATTATTTTGTACACCGAGTTATATTCATACTGTGTGGAGTTCATCATCTTGGAGGGAGATAACCTAACTAGGCTGTTTCCTGGAACGTTCCTGGATTGGGGTGGTTTCCAGCTGGATTCCATGCACTTGTTTGGAATTTTGACCGCACTTATTGTCCTCCCCACTGTTTGGTTAAGGGACCTTCGCGTAATCTCGTATCTTTCAGCTGGAGGGGTTGTTGCAACGATTCTTATTGTGATTTGTGTGTTTCTTGTTGGGGTAACAACGGATGTTGGGTTCCATCACCCAGGTCAAGTTGTGAATTGGAGTGGCATTCCATTTGCTATTGGTATCTATGGGTTTTGCTACTCAGGACATTCAGTTTTTCCAAACATTTACCAGTCCATGGCTGACAAAACCAAATTCACCAGCGCCTTAATTATATGCTTTGTTCTGTGTATTTTAGTATATGGAGGTGTTGCAGTCATGGGATATCTCATGTTTGGTGAAGCCACCTTGTCTCAGATAACACTGAACATGCCGCCACATTCCTTTGTCTCTAAAGTTGCATTGTGGACCACAGTAATTAACCCGTTCACAAAATATGCTTTGTTGATGAACCCGCTGGCGAGAAGTATAGAGGAGTTGCTACCTGCCAGAGTTGTGGATAGCTATTGGTGTTTCATTACACTTAGATCAGCGCTTGTTATATCTACAGTCTGTTGTGCCTTTCTGATTCCTTTCTTCGGACTTGTGATGGCTCTAATCGGCTCTGTACTCAGTATCCTTGTGGCTGTCATAATGCCAGCTCTATGTTTTATGAAAATTATGCGGGGAAAAGCGACAAAAACGCAGGTTGCTCTGAGCATCACAATCGCAGTGTTGGGAGTCGTAAGTGGAATTCTGGGAACATATTCTTCGGTGAAAAGACTTGCGGAGAGCTACTAA 1587 0.4423 MASDEKQKDAEFFFDQNEEDANDDDESTKLVIESSSDSGSDDDGNGGPDTFSSQQWPQSYKETVDSYTIAASPNIGAAVLRTPSLIYSSFVNRSKSSLSLDGKTPLLSDHEDLIQKKSSWLEGVSLQKQLTGELPIGQGCSLTQTVFNGVNVMAGVGLLSTSYTVKQAGWASLLVLVLFAVVCCYTATLMRYCFESREGILTYPDIGEAAFGRAGRLAISIILYTELYSYCVEFIILEGDNLTRLFPGTFLDWGGFQLDSMHLFGILTALIVLPTVWLRDLRVISYLSAGGVVATILIVICVFLVGVTTDVGFHHPGQVVNWSGIPFAIGIYGFCYSGHSVFPNIYQSMADKTKFTSALIICFVLCILVYGGVAVMGYLMFGEATLSQITLNMPPHSFVSKVALWTTVINPFTKYALLMNPLARSIEELLPARVVDSYWCFITLRSALVISTVCCAFLIPFFGLVMALIGSVLSILVAVIMPALCFMKIMRGKATKTQVALSITIAVLGVVSGILGTYSSVKRLAESY 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1884g00002 528 MobiDBLite consensus disorder prediction 1 58 - -
Pral1884g00002 528 MobiDBLite consensus disorder prediction 1 15 - -
Pral1884g00002 528 Pfam Transmembrane amino acid transporter protein 141 520 IPR013057 -
Pral1884g00002 528 PANTHER OS05G0424000 PROTEIN-RELATED 145 511 - -
Pral1884g00002 528 MobiDBLite consensus disorder prediction 32 58 - -
Pral1884g00002 528 Gene3D Amino acid/polyamine transporter I 138 525 - -
Pral1884g00002 528 FunFam Amino acid transporter AVT1A 138 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1884g00002 Pral-Chr1884 14467 19376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1884g00002 3 463 Amino Acid or Auxin Permease AAAP Family AT2G41190 63.482 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1884g00002 K15015 - gmx:100790344 759.599