Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1883g00006 ATGCTTTCATGTCAAAGATACCAGTTTCGCTCTCCATGCTCTCTCCCTCTCCAGTCCCTCTCCACCCCAACTTTCACCGTTGTCAACTGCCAAAATCCACATGGCCCAGATACCCAGAACCTCATTCTCCGCCAGCAGAACTCCAAATCCACCGCCTTTCTCCTTCACCAACTATCTCCCGACCGAGAAAACCATCATTCCCAGCCATTCAATCTCAAATCCGGTGACCTTCAACACAACATGCCGGATGAAGAAAAGATTAAGCTTTTAGAGCTTTCCCTTGTAAGGAGAAGAACCCCTCAGTTTCCTGGGTCTATCTATGTTCAATCTCCTAGTGATCCTGATGTGGGTTCTTCTTTGCCGCCTCTGCGAACTCTGTTTAGAGAAAAAGTGGAAGATGAAGATGCAGACGAGGAGGAGATAATAATGCGTGCGATTGAGATTCGAAGGAAGGTGACGCGAGAGATTTTTTTGGAAGCTATGAGAAAGGGCAAGTTTGGAATCACGTACGCTACCAATTTGGTCAATCGATTGACTGGTTTTATCGATTACGTCATGATTGAAGCTGCTTCGATGAAACGAATACCTCAGTATTCGCATTCTACTTTCAATTTACGCGCCAAAACTGTCATAGACGACTTACAAGTTGTGCCTCTTATCAGATGGTTGAAGCATAATGCACTGTCATATCATCGGATATCCAAGCTCATTTTGATGTCAAGAGGAAACCTTGAGTCTATAAGACGTCTTGCTGAGTGGTTGAAGTCAGTAAAGGTGAAAGGAGAATTTCTCGGGGTTACACTTGTGAATGCTGGAGATAATATTCTTGATCGCAGCAATGGGGAACTGGATGGGATTGTAGAGTATTTAGAGAGCAAGGGAGTCAGGAGGGATTGGATGGGTTATGTGATAAGTCGCTGTCCTCAACTGCTATCTTACAGCATGGAAGAAGTAGAGACTCGTGTGAAATTCTACTTAGATATGGGCTTAAATAATCATGATTTTGGCACAATGGTTTTTGATTATCCTAAAGCTCTTGGTTACTATACTCTAGAAGAAATGAATCAGAAGGTTAATTACTTGAAGGAGTTTGGGCTCAAAAGTGAGGATGTTGGCAGATTGTTAGCATTTAAGCCTCATTTGATGGGATGTAGCATTGAAGAAGGATGGAAGCCTCTTGCTAAGTACTTGTATTATTATGGGGTCACCCGAGATGGTATGAGGAGAATGCTTATGATCAAACCAATGGTTTTTTGTATTGATTTGCAGACAACTATTCTGCCCAAGGTAAAGTTTTTTCAGGATATAGGGATTCGAGATGATGCAATCGGAAACATGCTTGTGAAGTTTCCTACTCTGCTCACATACAGCCTCTACAAGAAGATTAGGCCAGTGGTCATATTCTTGATGACCAAAGCTGGGGTCAGCGATGAAGATATCGCAAAGGCTATTGCTCTGGGACCTGAGCTCTTGGGATGCAGCATAACGCATAAGCTTGAAGTGAATGTAAAATATTATCTGTCACTTGGTATACGGCTTAAGCAACTGGGTGAGATGATTGCGGATTTCCCAATGCTGCTCAGATACAACATAGATATCCTTCGTCCCAAGTATAGTTATTTGCGGCGAACCATGGTCCGGCCTTTGGAAGATCTCATCGAGTTTCCAAGGTTTTTCAGTTATTCTCTGAATGGTCGAATTATTCCAAGGCACAAGGTTCTGGTGGAAAATCGGATTAATTTGAAGCTGCGTTACATGTTGGCTTGTTCTGATGAAGAATTCAGGAAATTGGTTGACTCTGAAATTAGAAAGCGACAAACACTGCTATCTGCAGGCAAGAGTGCTGATATTACGGAACCTCACAGACGAACAACTTGA 1878 0.4281 MLSCQRYQFRSPCSLPLQSLSTPTFTVVNCQNPHGPDTQNLILRQQNSKSTAFLLHQLSPDRENHHSQPFNLKSGDLQHNMPDEEKIKLLELSLVRRRTPQFPGSIYVQSPSDPDVGSSLPPLRTLFREKVEDEDADEEEIIMRAIEIRRKVTREIFLEAMRKGKFGITYATNLVNRLTGFIDYVMIEAASMKRIPQYSHSTFNLRAKTVIDDLQVVPLIRWLKHNALSYHRISKLILMSRGNLESIRRLAEWLKSVKVKGEFLGVTLVNAGDNILDRSNGELDGIVEYLESKGVRRDWMGYVISRCPQLLSYSMEEVETRVKFYLDMGLNNHDFGTMVFDYPKALGYYTLEEMNQKVNYLKEFGLKSEDVGRLLAFKPHLMGCSIEEGWKPLAKYLYYYGVTRDGMRRMLMIKPMVFCIDLQTTILPKVKFFQDIGIRDDAIGNMLVKFPTLLTYSLYKKIRPVVIFLMTKAGVSDEDIAKAIALGPELLGCSITHKLEVNVKYYLSLGIRLKQLGEMIADFPMLLRYNIDILRPKYSYLRRTMVRPLEDLIEFPRFFSYSLNGRIIPRHKVLVENRINLKLRYMLACSDEEFRKLVDSEIRKRQTLLSAGKSADITEPHRRTT 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1883g00006 625 FunFam BnaA09g42960D protein 374 605 - -
Pral1883g00006 625 PANTHER CGI-12 PROTEIN-RELATED 284 382 IPR003690 GO:0003690|GO:0006355
Pral1883g00006 625 SMART mt_12 549 580 IPR003690 GO:0003690|GO:0006355
Pral1883g00006 625 SMART mt_12 517 547 IPR003690 GO:0003690|GO:0006355
Pral1883g00006 625 SMART mt_12 301 331 IPR003690 GO:0003690|GO:0006355
Pral1883g00006 625 SMART mt_12 372 403 IPR003690 GO:0003690|GO:0006355
Pral1883g00006 625 SMART mt_12 336 367 IPR003690 GO:0003690|GO:0006355
Pral1883g00006 625 SMART mt_12 444 476 IPR003690 GO:0003690|GO:0006355
Pral1883g00006 625 SMART mt_12 481 512 IPR003690 GO:0003690|GO:0006355
Pral1883g00006 625 SMART mt_12 408 439 IPR003690 GO:0003690|GO:0006355
Pral1883g00006 625 Gene3D Transcription termination factor 3, mitochondrial 376 601 IPR038538 -
Pral1883g00006 625 Pfam mTERF 287 594 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1883g00006 Pral-Chr1883 52551 56542 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral1883g00006 mTERF 1.4e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1883g00006 K15031 - qsa:O6P43_001902 900.582