Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1882g00001 ATGGCCATCGGAGCTTCTTTTTCGGCTGTGGCGGCGGGGTTTGCCCCGTTCTTTGTTGCTTCTATTAGAAATGCTTCTATCGGTGTGACAACATTCGAAGTCAGCTCATTGAAGAAGTTGAAAACATCTCCATATTTGACGTTCTACTGTCGGCTTCATATCTACGCGGTTAAAATGCCTTTAATATCATTGAGGTATGAAAGCGAATTCATTGAAAGCATTGTTGAAGAAATGGGGTCAAAGTTACTTGATAAATCAGCATTTGGTCATGGCAAGTTAATTGGAATTGGACCAAAATTAGACAAACTGAAGTCAATCGTTGCAAGTGAATCAGAAGGAGTTGGGTTTATAGGAATATGGGGCACAGGAGGTGTAGGCAAAACAACTCTTGCTAGAGCCTTTTATGAGCAGGAGCGAGAGCGCAAAAACTTTGAGATTCACTGCTTCCTTGATAATATTAGAGAGGCATGGGAAAAAGAAGGTTTGATTTCATTGCCAAGAAAACTTCTTTCTTCTCTAGATAAAAAGAGTATGGAAGTGGCTGACTTTTATGAAGGAATGGAGTTAATAAAAAGCAAGTTGACTGACAGAAAAATTCTACTTGTCCTTGACGATGTGAGTGATATTAGGCAACTTGAAAATTTGGCTCCAAAGAAAGGATGGTTCAGAGAAGGGAGCATAATAATAATAACAACTAGGGATAAGCATTTGTTATCATCACACAGTGTATCTGCTGTGTATGAATTCAAATTATTGAGTTATAACGAGTCCCTTGAACTTTTCCTTGAAAAAGCTTTTAAAGAAGAGCATCCTAATGAAGATTATTTGAAACTTGCTAGAACCGTCATTGAGTATGCTAGAGGCCTTCCTTTAGTGCTCATAGTGTTAGGTTCATCTCTTTGCAAAAGACCTATAGTGGAATGGAAGGATGAACTAGCTAAGCTCAAGAAAATTCCTCCAAAGGACATTTTGAAGATACTTCAGGTGAGTTTTGATGGACTGGATGATCAGCAGAAAACCATATTCCTGGATGTTGCTTGCTTTTTCAATGGGATGGACAAAGATCATGTCATACAAATTTTAGAAACTTTGGATAAGGATTTTCGCCCAGAAACTGAGATAAATGTTCTCATTAAGAAATCACTAATGATTAGTTATGAAGGGCATTTGTGGTCTCTCCCAAGCCTAAAGTCCCTCGATCTATCTCATTCAAAATGCCTCGTCAAAGTCCCAAATTTTGATGGAATTCCTCATCTTGAAAAGTTGATTCTTGAAGGGTGTTCTAACTTGGTTGAAATTCCCCACTCTCTTGGGCAACACAAGAAACTTGTCATTGTTGACTTGAAAGATTGCAAAGAAGTTAAAACGCTTCCAGAAAAATTTGAGATGAATAGCTTGGAGACTTTTATTCTATCGGGTTGTTCAAAAGTTAGAAAACTTCCTGAGTTTGGAAAAGATATGGCATGTCTATCGAAGCTTGATTTAGAGAAGACTGCTCTAGCCAAACTACCTCAATCGTTGGGTAATTTGATTGGTCTCGTTGAATTAAATTTGACAAACTGCAAAAAGCTGGTTTGTCTTCCATGTAGTGTTAGCAAGTTGAAAGCTCTGAAAGTTATCAAAATTTCTAAATGCTCAAAGCTTTCATGGCTGCCAGAGAATTTGAATGAAAATGAAGCTTTGGAAGAGCTGGATTTGAGTGGGATTGCTATACAAGGGTTATCATTTAGTGACTACAATAGCGAAACACAATCTTCATCATCATGGAGTTGCTTATCCCTTCTTCAAAGGCCTTCAAGCTCAAAAATTTTTGTTGCCGCCGTCTTTGTCATCTTGAAACATTTACTTATTTTTGCAATCTCCATGATGGATCACTTCCTGATGACATCAGCATGTTATCATCATTGGAAATTTTAG 1917 0.3777 MAIGASFSAVAAGFAPFFVASIRNASIGVTTFEVSSLKKLKTSPYLTFYCRLHIYAVKMPLISLRYESEFIESIVEEMGSKLLDKSAFGHGKLIGIGPKLDKLKSIVASESEGVGFIGIWGTGGVGKTTLARAFYEQERERKNFEIHCFLDNIREAWEKEGLISLPRKLLSSLDKKSMEVADFYEGMELIKSKLTDRKILLVLDDVSDIRQLENLAPKKGWFREGSIIIITTRDKHLLSSHSVSAVYEFKLLSYNESLELFLEKAFKEEHPNEDYLKLARTVIEYARGLPLVLIVLGSSLCKRPIVEWKDELAKLKKIPPKDILKILQVSFDGLDDQQKTIFLDVACFFNGMDKDHVIQILETLDKDFRPETEINVLIKKSLMISYEGHLWSLPSLKSLDLSHSKCLVKVPNFDGIPHLEKLILEGCSNLVEIPHSLGQHKKLVIVDLKDCKEVKTLPEKFEMNSLETFILSGCSKVRKLPEFGKDMACLSKLDLEKTALAKLPQSLGNLIGLVELNLTNCKKLVCLPCSVSKLKALKVIKISKCSKLSWLPENLNENEALEELDLSGIAIQGLSFSDYNSETQSSSSWSCLSLLQRPSSSKIFVAAVFVILKHLLIFAISMMDHFLMTSACYHHWKF 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1882g00001 638 Gene3D - 251 335 IPR042197 -
Pral1882g00001 638 Gene3D Ribonuclease Inhibitor 363 605 IPR032675 -
Pral1882g00001 638 Pfam NB-ARC domain 109 318 IPR002182 GO:0043531
Pral1882g00001 638 Gene3D - 92 246 IPR027417 -
Pral1882g00001 638 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 344 IPR027417 -
Pral1882g00001 638 SUPERFAMILY L domain-like 382 576 - -
Pral1882g00001 638 PRINTS Disease resistance protein signature 391 407 - -
Pral1882g00001 638 PRINTS Disease resistance protein signature 116 131 - -
Pral1882g00001 638 PRINTS Disease resistance protein signature 193 207 - -
Pral1882g00001 638 PRINTS Disease resistance protein signature 286 300 - -
Pral1882g00001 638 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 394 482 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1882g00001 Pral-Chr1882 5150 8981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1882g00001 361 574 WRKY Transcription Factor Family AT5G45050 24.576 1.45e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1882g00001 - - pcin:129317383 481.87