Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1876g00002 ATGGCGCTTTCGATTTCAACTCTGAACCATTTCGCTTCGACACAACTCAAATGCTTTCCTTCCAACTTCACCATTCTCGCCTCCTCCTTCTCCTTTCTTGTTCCTTCTTCTGCCTCTTCTACCTTCTCGCCGAGGAGATTTTCTGCGCTGGCCATTCCCAAACGCTGTCGTTTCCGACGCGTTTCTGCCTCTGCTGCTTCTGGAGATGACGATTCCCGACGGGCTGGTGAACTTTCGTCCCTCTCACCTGAAGTTGTTGTTCTCAATGTTGAGGGTATGATGTGCGAGGGATGTGCAGATAGTGTGAAAAAGCTTCTGGAGAGTCGACCTCAAGTACATCTGCTAGCGTAA 351 0.4986 MALSISTLNHFASTQLKCFPSNFTILASSFSFLVPSSASSTFSPRRFSALAIPKRCRFRRVSASAASGDDDSRRAGELSSLSPEVVVLNVEGMMCEGCADSVKKLLESRPQVHLLA 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1876g00002 116 ProSiteProfiles Heavy-metal-associated domain profile. 84 116 IPR006121 GO:0046872
Pral1876g00002 116 SUPERFAMILY HMA, heavy metal-associated domain 84 113 IPR036163 GO:0046872
Pral1876g00002 116 Gene3D - 84 115 - -
Pral1876g00002 116 CDD HMA 87 113 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1876g00002 Pral-Chr1876 21680 22880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1876g00002 82 112 Primary Pumps ATPases AT4G33520 58.065 1.48e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1876g00002 - - ghi:107949134 59.6918