Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1874g00002 ATGGAGGCGATGGTTTGCCAAAATTCATTTCAGCAAGACCTGAAAACCCTAATGTCAGATTCTTTCGATTCGATGGTTTGCGACCCCACTTCAAGATTAATTCCTACTGGGTTTAGGGGATCTGAAAGCTCAGGAGAGGAATATGTGCTGTTCGTAAATGCCGGGGAGGAGGCTGTAAATGAAGCAGATGGTGGTTTGACTATCATGGCCGACTCCTTCTTTGAAGGTGGGAATGTTTTACGTACCGATGAGCAAATAACGGAGGCTGGAGATTGTCCGTTTATCTATCAAACAGCACGGTTAGGAAATTTTTGCTATAGATTTGATAAGATTCCTCGTGGAGACTACATTGTGGATCTTCATTTTGCGGAGATCATTAACACAAATGGGCCTAAAGGTATAAGGGTGTTCAACGTATATATCCAAGAAGAAAAGGTTCTGTCTGAATTAGATATCTTTGCGGTTGTTGGAGCCAACAAACCACTACGGTTGATTGATTCAAAAGTATCTGTGAAGGATGATGGTGTAATTCTCATAAGATTTGAAAGTATCAATGGAAGCCCAGTGGTTAGTGGGATCTGCATCAGGAGAGCAACAAAGGAATCAGTTCCCCAAGGGACATGTGATTACATTAAATGTAACTACTGTGCCGGACAGATTGAAATTCCTTCATCACAGCTGAAATCTATGCAAACAAAATCTACTGCGAAATACGAAAAGAAGGTTGAAGAGCTTACCATGCAGTGTCAGTTAAAGGCAAAAGAATGCCATGAGGCATGGATGTCATTAACTGCAACAAATGAGCAATTGGAGACTGTCCGGATGGAACTTGACAATGTGACATTTAAGACGCTCTCTCTTGATCAAACTGTGGAGAAACAAGCTGAAAAGTTAAGGAACATTTCTAGCAGTTATGACCATGATAAGAAGAAATGGACGGAAGCAATCAGATGTTTACAAGAAAAAATAAAGTTGATGAAGAGTGAACATGCTCAACTTTCCCGTGAAGCACATGAATGCGTCGATTCAATCCCTGAGCTAAATAAAATGGTTTTTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATTTTAAAGTGAAATACAATGAAGAGATGGCACAAAGGAAAAAGCTATTCAATGAAGTTCAGGAGGCTAAAGGGAACATTAGAGTTTTCTGTCGTTGTCGTCCAATGAATAAGGATGAAACCTTAGCTGGGGGTACATCAGTTGTGGATTTTGATGCAGCAAAGGATGGTTGCCTTGGAATTTTGACAGGTGGCTCCACCAAAAAAACCTTTAGATTTGACCGAGTTTATTCTCCAAAAGATGATCAAGTTGATGTTTTCTCTGATGCTTCAGCAATGGTAATCTCTGTGCTAGATGGCTACAACGTTTGCATATTTGCATACGGCCAAACAGGAACAGGAAAGACTTTTACTATGGAGGGAACAGAACAGAACAGAGGAGTAAATTACAGGACTCTTGCACACTTGTTTGAAATTGTCAAGGAAAGGAGTGAAACATTTGCATATGAAATTACTGTTAGCGTGCTTGAGGTTTATAATGAACAAATCAGAGATCTACTGGCTTCAGGACTATCATCAAAAAAGCTGGAGGTAAAACAAGCCTCTGAAGGTTCTCATCATGTTCCCGGCGTTATAGAAGCCAAGGCTAATAACATTGAGGACGCCTGGACTATACTGCAAACTGGAAGTAATGCGAGAGCCGTTGGAAGCAATAACGTGAATGAGCACAGCAGTCGATCTCACTGCATGCTTTGTATAACAGTAAAGACAAAAAATTTGATCAATGGTGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCAGGCAGCGAGAGACTTGCAAAAACTGACGTGCAAGGCATGCGACTTAAGGAAGCACAAAATATCAATAAATCTCTTTCAGCTCTTGGGGACGTGATATCCGCTTTAGCAAGCAAAAGTAGTCATATTCCATACCGGAATTCTAAATTGACACATTTACTTCAAGACTCCCTAGGAGGCGATTCCAAAGCCTTGATGTTTGTACAAATCAGTCCTTCGAACCAGGATTTAAGTGAGACTTTGAGCTCACTAAATTTTGCAACTCGAGTGAGGGGAGTTGAAATGGGTCCTGTCAAGAAGCAAATTGATACAAGTGAGCTTCAAAAGGTGAAAGCAATGCTTGAAAAGGCACGAAATGAGTGCAGAACTAAAGATGAATCCATACGGAAACTAGAAGAAAATCTGCAAAACTTGGAAAGTAAGGCCAAAGGCAAGGATAATGTTCACAGGAACCTACAGGAAACTATTAAAGAGCTTGAAGGCCAAATTGATTCCAAGATAGCCGTGCAAAAACAGTCAGAGAGACAAGTTCTTGAATTGTCAAACAAATTGAAGGGAAAGGATGAAACATGCAATGCTCTCCAACATCAGGTCAAAGAGCTGGAAAAGAAGCTGAAAGATAAATTGCAGTCTGAGACAGCAAGCTTCCAACAGAAGGTTTGGGATTTAGATAACAAACTGAGAGAGCAGGCGCGGGAGTCTGAGTATCAATCTGCCATTTTAAAAGACAAGGTTAAGGAGCTTGAGAGGAAACTGAAAGAGCAGGAACAGAATTCAGAGAACTTGATTCATCAAAAGGTAAAGGAGGTTGAGGACAGGTACAAAGAGAGAGAGCTGAAGTGGCAACAAACTCATAATTCTGTTGATGGGGTGAAGGCCACTCCTGTCGAAGGTAAATATAAAAGCTGCACAGGAGAGGACTATCCAAGCGAGAATGAGCCTCGCATTCTAAGGAGTTCAAACTCAATAAACCACTCGACAAATCAAGGTTCTGCTGCTTCGTTGAGAGGGAACGACTCCATTAATCAGATGAGAAGTAAAAGAGAATTCAGAAGCATTGAAACAGAGAACAATTTCGTTGACAGGAAAGTCATGAGGAAATCTGATCCTCCCAAATTAGGAAGATTAGGGAGGACAACTAGGCCTGTAATGGCTGCTTCTCAAGCCCCATTGACCCACAAGAGAGTCAGCAGAGACAGGGATCAGGTTCAGGGGATTAAAGAGAGGGACAACAAGAAGAAAATTTGGTCAAGATAG 3108 0.4128 MEAMVCQNSFQQDLKTLMSDSFDSMVCDPTSRLIPTGFRGSESSGEEYVLFVNAGEEAVNEADGGLTIMADSFFEGGNVLRTDEQITEAGDCPFIYQTARLGNFCYRFDKIPRGDYIVDLHFAEIINTNGPKGIRVFNVYIQEEKVLSELDIFAVVGANKPLRLIDSKVSVKDDGVILIRFESINGSPVVSGICIRRATKESVPQGTCDYIKCNYCAGQIEIPSSQLKSMQTKSTAKYEKKVEELTMQCQLKAKECHEAWMSLTATNEQLETVRMELDNVTFKTLSLDQTVEKQAEKLRNISSSYDHDKKKWTEAIRCLQEKIKLMKSEHAQLSREAHECVDSIPELNKMVFAVQELVKQCEDFKVKYNEEMAQRKKLFNEVQEAKGNIRVFCRCRPMNKDETLAGGTSVVDFDAAKDGCLGILTGGSTKKTFRFDRVYSPKDDQVDVFSDASAMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLAHLFEIVKERSETFAYEITVSVLEVYNEQIRDLLASGLSSKKLEVKQASEGSHHVPGVIEAKANNIEDAWTILQTGSNARAVGSNNVNEHSSRSHCMLCITVKTKNLINGECTKSKLWLVDLAGSERLAKTDVQGMRLKEAQNINKSLSALGDVISALASKSSHIPYRNSKLTHLLQDSLGGDSKALMFVQISPSNQDLSETLSSLNFATRVRGVEMGPVKKQIDTSELQKVKAMLEKARNECRTKDESIRKLEENLQNLESKAKGKDNVHRNLQETIKELEGQIDSKIAVQKQSERQVLELSNKLKGKDETCNALQHQVKELEKKLKDKLQSETASFQQKVWDLDNKLREQARESEYQSAILKDKVKELERKLKEQEQNSENLIHQKVKEVEDRYKERELKWQQTHNSVDGVKATPVEGKYKSCTGEDYPSENEPRILRSSNSINHSTNQGSAASLRGNDSINQMRSKREFRSIETENNFVDRKVMRKSDPPKLGRLGRTTRPVMAASQAPLTHKRVSRDRDQVQGIKERDNKKKIWSR 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1874g00002 1035 Coils Coil 848 882 - -
Pral1874g00002 1035 Pfam Malectin domain 49 193 IPR021720 -
Pral1874g00002 1035 MobiDBLite consensus disorder prediction 979 1035 - -
Pral1874g00002 1035 FunFam Kinesin-like protein KIN-14R 44 199 - -
Pral1874g00002 1035 CDD KISc_C_terminal 386 712 - -
Pral1874g00002 1035 FunFam kinesin-like protein KIN-14R 337 712 - -
Pral1874g00002 1035 Coils Coil 309 336 - -
Pral1874g00002 1035 Coils Coil 717 786 - -
Pral1874g00002 1035 Pfam Kinesin motor domain 394 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral1874g00002 1035 PANTHER KINESIN-LIKE PROTEIN KLP-3 55 791 IPR027640 GO:0003777|GO:0007018
Pral1874g00002 1035 SMART kinesin_4 386 718 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral1874g00002 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 746 IPR027417 -
Pral1874g00002 1035 MobiDBLite consensus disorder prediction 1010 1035 - -
Pral1874g00002 1035 Gene3D - 44 201 - -
Pral1874g00002 1035 Gene3D Kinesin motor domain 383 754 IPR036961 -
Pral1874g00002 1035 Coils Coil 368 388 - -
Pral1874g00002 1035 Coils Coil 801 828 - -
Pral1874g00002 1035 PRINTS Kinesin heavy chain signature 611 629 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral1874g00002 1035 PRINTS Kinesin heavy chain signature 660 681 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral1874g00002 1035 PRINTS Kinesin heavy chain signature 462 483 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral1874g00002 1035 PRINTS Kinesin heavy chain signature 580 597 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral1874g00002 1035 ProSitePatterns Kinesin motor domain signature. 610 621 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pral1874g00002 1035 ProSiteProfiles Kinesin motor domain profile. 388 710 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1874g00002 Pral-Chr1874 6176 12675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1874g00002 335 763 Calmodulin-binding Proteins AT5G65930 39.862 8.83e-86 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1874g00002 K10406 - gmx:100800016 1490.71